CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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D915_11240
(
Fasciola hepatica
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
D915_11240
T336149_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D915_11240
Sox
22
82
QIFAQYLRRATLQLFPDAHNVHLSQRIGLIWRQLTDELRQQYSTEASRLLRLHAIEFPDYK
Links
Other
Sox
family TFs
Other
Fasciola hepatica
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DILT_0001785501
Diphyllobothrium latum
DILT_0001785501
N
0.656
SPER_0000914201
Spirometra erinaceieuropaei
SPER_0000914201
N
0.656
SMTD_0000090701
Schistosoma mattheei
SMTD_0000090701
N
0.653
Sjc_0084710
Schistosoma japonicum
Sjc_0084710
N
0.606
SCUD_0001126301
Schistosoma curassoni
SCUD_0001126301
N
0.564
SMRZ_0002061501
Schistosoma margrebowiei
SMRZ_0002061501
N
0.564
SMTD_0001685201
Schistosoma mattheei
SMTD_0001685201
N
0.564
D915_01276
Fasciola hepatica
D915_01276
N
0.562
HDID_0000312901
Hymenolepis diminuta
HDID_0000312901
N
0.558
ECPE_0001194001
Echinostoma caproni
ECPE_0001194001
N
0.555
TTAC_0001064401
Hydatigera taeniaeformis
TTAC_0001064401
N
0.545
PXEA_0000763901
Protopolystoma xenopodis
PXEA_0000763901
N
0.541
csin107154
Clonorchis sinensis
csin107154
I
0.530
T265_01843
Opisthorchis viverrini
T265_01843
I
0.530
DILT_0001316601
Diphyllobothrium latum
DILT_0001316601
N
0.526
Sjc_0119940
Schistosoma japonicum
Sjc_0119940
N
0.513
MCOS_0000919201
Mesocestoides corti
MCOS_0000919201
N
0.498
ECANG7_01540
Echinococcus canadensis
ECANG7_01540
I
0.496
EmuJ_000437800
Echinococcus multilocularis
EmuJ_000437800
I
0.496
HmN_000494900
Hymenolepis microstoma
HmN_000494900
I
0.496
HNAJ_0000181101
Hymenolepis nana
HNAJ_0000181101
I
0.496
TASK_0000729701
Taenia asiatica
TASK_0000729701
I
0.496
TsM_000697900
Taenia solium
TsM_000697900
I
0.496
Smp_076600
Schistosoma mansoni
Smp_076600
I
0.493
SMRZ_0000554201
Schistosoma margrebowiei
SMRZ_0000554201
I
0.491
A_00545
Schistosoma haematobium
A_00545
N
0.472
ENSSTOG00000011011
Ictidomys tridecemlineatus
ENSSTOG00000011011
I
0.457
Myotis_brandtii_SOX2_10019709
Myotis brandtii
Myotis_brandtii_SOX2_10019709
I
0.451
SOX8
Equus caballus
ENSECAG00000016320
I
0.449
ENSLOCG00000011834
Lepisosteus oculatus
ENSLOCG00000011834
I
0.449
Gfo_R006305
Geospiza fortis
Gfo_R006305
I
0.449
GPLIN_000970900
Globodera pallida
GPLIN_000970900
N
0.449
GPLIN_001405800
Globodera pallida
GPLIN_001405800
I
0.449
SPER_0001708101
Spirometra erinaceieuropaei
SPER_0001708101
N
0.449
SPER_0001952401
Spirometra erinaceieuropaei
SPER_0001952401
N
0.449
SCHCODRAFT_73771
Schizophyllum commune
SCHCODRAFT_73771
N
0.444
ENSOARG00000000906
Ovis aries
ENSOARG00000000906
I
0.437
ENSPANG00000005859
Papio anubis
ENSPANG00000005859
I
0.437
XP_002170844.1
Hydra magnipapillata
XP_002170844.1
I
0.437
SMU15001429
Schmidtea mediterranea
SMU15001429
I
0.431
SMU15001430
Schmidtea mediterranea
SMU15001430
I
0.431
ACOM029353
Anopheles coluzzii
ACOM029353
I
0.430
L798_12049
Zootermopsis nevadensis
L798_12049
I
0.428
ENSP00000322568
Macaca fascicularis
ENSP00000322568
I
0.428
SMU15030186
Schmidtea mediterranea
SMU15030186
N
0.428
GPLIN_000596700
Globodera pallida
GPLIN_000596700
I
0.427
maker-nMf.1.1.scaf00287-augustus-gene-0.13
Meloidogyne floridensis
maker-nMf.1.1.scaf00287-augustus-gene-0.13
I
0.427
sox-2
Caenorhabditis elegans
WBGene00004949
I
0.424
Ogr08337
Ophisaurus gracilis
Ogr08337
N
0.424
LDEC019307
Leptinotarsa decemlineata
LDEC019307
N
0.424
AMEC000538
Anopheles melas
AMEC000538
I
0.424
Hba_21281
Heterorhabditis bacteriophora
Hba_21281
N
0.424
PPAI003639
Phlebotomus papatasi
PPAI003639
N
0.422
csin108932
Clonorchis sinensis
csin108932
I
0.418
T265_14506
Opisthorchis viverrini
T265_14506
I
0.418