CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PXEA_0000763901
(
Protopolystoma xenopodis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
PXEA_0000763901
T336838_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PXEA_0000763901-mRNA-1
Sox
2
52
VLHAFPDAPNVHISQRVGALWRGLESPLRDQYANEAKRLADLHAAEFPDYK
Links
Other
Sox
family TFs
Other
Protopolystoma xenopodis
TFs
102 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TTAC_0001064401
Hydatigera taeniaeformis
TTAC_0001064401
N
0.698
DILT_0001785501
Diphyllobothrium latum
DILT_0001785501
N
0.592
SPER_0000914201
Spirometra erinaceieuropaei
SPER_0000914201
N
0.592
SMTD_0000090701
Schistosoma mattheei
SMTD_0000090701
N
0.587
SPER_0001708101
Spirometra erinaceieuropaei
SPER_0001708101
N
0.563
SPER_0001952401
Spirometra erinaceieuropaei
SPER_0001952401
N
0.563
Myotis_brandtii_SOX2_10019709
Myotis brandtii
Myotis_brandtii_SOX2_10019709
I
0.553
Sjc_0084710
Schistosoma japonicum
Sjc_0084710
N
0.551
GPLIN_000970900
Globodera pallida
GPLIN_000970900
N
0.551
ENSSTOG00000011011
Ictidomys tridecemlineatus
ENSSTOG00000011011
I
0.547
D915_11240
Fasciola hepatica
D915_11240
N
0.541
D915_01276
Fasciola hepatica
D915_01276
N
0.533
ECPE_0001194001
Echinostoma caproni
ECPE_0001194001
N
0.533
SCUD_0001126301
Schistosoma curassoni
SCUD_0001126301
N
0.533
SMRZ_0002061501
Schistosoma margrebowiei
SMRZ_0002061501
N
0.533
SMTD_0001685201
Schistosoma mattheei
SMTD_0001685201
N
0.533
MESCA012239
Megaselia scalaris
MESCA012239
I
0.526
sox-2
Caenorhabditis elegans
WBGene00004949
I
0.526
Ogr08337
Ophisaurus gracilis
Ogr08337
N
0.526
LDEC019307
Leptinotarsa decemlineata
LDEC019307
N
0.526
AMEC000538
Anopheles melas
AMEC000538
I
0.526
Hba_21281
Heterorhabditis bacteriophora
Hba_21281
N
0.526
SMU15030186
Schmidtea mediterranea
SMU15030186
N
0.523
ENSPANG00000005859
Papio anubis
ENSPANG00000005859
I
0.520
CNM02020
Cryptococcus neoformans
CNM02020
N
0.518
AOL_s00081g337
Arthrobotrys oligospora
AOL_s00081g337
N
0.517
DRE_00029
Drechslerella stenobrocha
DRE_00029
N
0.517
CFIO01_04514
Colletotrichum fioriniae
CFIO01_04514
N
0.516
csin108932
Clonorchis sinensis
csin108932
I
0.511
PPAI003639
Phlebotomus papatasi
PPAI003639
N
0.510
H072_9933
Dactylellina haptotyla
H072_9933
N
0.508
UCREL1_749
Eutypa lata
UCREL1_749
N
0.506
XP_002935940
Xenopus tropicalis
XP_002935940
N
0.506
RPRC013413
Rhodnius prolixus
RPRC013413
N
0.502
SOX8
Equus caballus
ENSECAG00000016320
I
0.494
ENSLOCG00000011834
Lepisosteus oculatus
ENSLOCG00000011834
I
0.494
GLOINDRAFT_323774
Rhizophagus irregularis
GLOINDRAFT_323774
N
0.492
ENSOARG00000000906
Ovis aries
ENSOARG00000000906
I
0.491
ACOM029353
Anopheles coluzzii
ACOM029353
I
0.491
ENSP00000322568
Macaca fascicularis
ENSP00000322568
I
0.490
HDID_0000312901
Hymenolepis diminuta
HDID_0000312901
N
0.490
TRE_0000259001
Trichobilharzia regenti
TRE_0000259001
N
0.490
PLICRDRAFT_78649
Plicaturopsis crispa
PLICRDRAFT_78649
N
0.487
Sjc_0107520
Schistosoma japonicum
Sjc_0107520
N
0.485
PXEA_0002992801
Protopolystoma xenopodis
PXEA_0002992801
N
0.485
PDIP_33190
Penicillium digitatum
PDIP_33190
N
0.484
PEX1_064750
Penicillium expansum
PEX1_064750
N
0.484
SOX2
Felis catus
ENSFCAG00000029205
I
0.483
SOX2
Procavia capensis
ENSPCAG00000003690
I
0.483
Sjc_0119940
Schistosoma japonicum
Sjc_0119940
N
0.482
T265_14506
Opisthorchis viverrini
T265_14506
I
0.482
UCREL1_469
Eutypa lata
UCREL1_469
N
0.479
ENSOANG00000002448
Ornithorhynchus anatinus
ENSOANG00000002448
I
0.474
Brh_R004116
Buceros rhinoceros
Brh_R004116
N
0.474
GPLIN_000596700
Globodera pallida
GPLIN_000596700
I
0.474
CC1G_05598
Coprinopsis cinerea
CC1G_05598
N
0.471
PFICI_02946
Pestalotiopsis fici
PFICI_02946
N
0.465
GLOINDRAFT_25375
Rhizophagus irregularis
GLOINDRAFT_25375
N
0.464
HMEL006651
Heliconius melpomene
HMEL006651
I
0.459
SOX12
Dasypus novemcinctus
ENSDNOG00000044763
N
0.457
GLOINDRAFT_346686
Rhizophagus irregularis
GLOINDRAFT_346686
N
0.456
GLOINDRAFT_83691
Rhizophagus irregularis
GLOINDRAFT_83691
N
0.456
YQE_08562
Dendroctonus ponderosae
YQE_08562
N
0.456
AMEM007694
Anopheles merus
AMEM007694
N
0.456
DILT_0001316601
Diphyllobothrium latum
DILT_0001316601
N
0.456
A1O9_05704
Exophiala aquamarina
A1O9_05704
N
0.454
HMEL002398
Heliconius melpomene
HMEL002398
I
0.454
sox13.S
Xenopus laevis
XB-GENE-865496
I
0.452
sox5.S
Xenopus laevis
XB-GENE-865667
I
0.452
GB40963
Apis mellifera
GB40963
N
0.448
gw.110.115.1
Branchiostoma floridae
gw.110.115.1
N
0.448
GYMLUDRAFT_143012
Gymnopus luxurians
GYMLUDRAFT_143012
N
0.447
Afo_R012670
Aptenodytes forsteri
Afo_R012670
N
0.447
A_00545
Schistosoma haematobium
A_00545
N
0.442
MESCA006364
Megaselia scalaris
MESCA006364
N
0.440
RPRC001038
Rhodnius prolixus
RPRC001038
N
0.440
GPLIN_001405800
Globodera pallida
GPLIN_001405800
I
0.440
GLOTRDRAFT_8101
Gloeophyllum trabeum
GLOTRDRAFT_8101
N
0.439
K443DRAFT_58201
Laccaria amethystina
K443DRAFT_58201
N
0.439
LACBIDRAFT_169971
Laccaria bicolor
LACBIDRAFT_169971
N
0.439
SCLCIDRAFT_59496
Scleroderma citrinum
SCLCIDRAFT_59496
N
0.439
MCOS_0000919201
Mesocestoides corti
MCOS_0000919201
N
0.438
PLEOSDRAFT_1017219
Pleurotus ostreatus
PLEOSDRAFT_1017219
N
0.435
fgenesh1_pg.C_scaffold_11000031
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_11000031
N
0.434
PPAI005428
Phlebotomus papatasi
PPAI005428
N
0.434
e_gw.60.194.1
Branchiostoma floridae
e_gw.60.194.1
N
0.432
POSPLDRAFT_104634
Postia placenta
POSPLDRAFT_104634
N
0.430
PTTG_00444
Puccinia triticina
PTTG_00444
N
0.428
WALSEDRAFT_59420
Wallemia sebi
WALSEDRAFT_59420
N
0.428
Smp_076600
Schistosoma mansoni
Smp_076600
I
0.427
ECANG7_01540
Echinococcus canadensis
ECANG7_01540
I
0.427
EmuJ_000437800
Echinococcus multilocularis
EmuJ_000437800
I
0.427
HmN_000494900
Hymenolepis microstoma
HmN_000494900
I
0.427
HNAJ_0000181101
Hymenolepis nana
HNAJ_0000181101
I
0.427
TASK_0000729701
Taenia asiatica
TASK_0000729701
I
0.427
TsM_000697900
Taenia solium
TsM_000697900
I
0.427
SMRZ_0000554201
Schistosoma margrebowiei
SMRZ_0000554201
I
0.425
SERLA73DRAFT_139986
Serpula lacrymans
SERLA73DRAFT_139986
N
0.424
AWRI1499_3370
Brettanomyces bruxellensis
AWRI1499_3370
N
0.420
LACBIDRAFT_333050
Laccaria bicolor
LACBIDRAFT_333050
N
0.418
sox9a
Tetraodon nigroviridis
ENSTNIG00000001901
N
0.415
XP_002170844.1
Hydra magnipapillata
XP_002170844.1
I
0.415