CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SMRZ_0002061501
(
Schistosoma margrebowiei
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SMRZ_0002061501
T336941_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMRZ_0002061501-mRNA-1
Sox
15
75
KLFAQHIRRNVLRVFSDASNSVISQQLGDLWRTVPRSCRNQYDDEANRLVKIHQIEFPNYK
Links
Other
Sox
family TFs
Other
Schistosoma margrebowiei
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCUD_0001126301
Schistosoma curassoni
SCUD_0001126301
N
0.741
SMTD_0001685201
Schistosoma mattheei
SMTD_0001685201
N
0.741
ECPE_0001194001
Echinostoma caproni
ECPE_0001194001
N
0.733
D915_01276
Fasciola hepatica
D915_01276
N
0.726
Sjc_0119940
Schistosoma japonicum
Sjc_0119940
N
0.690
A_00545
Schistosoma haematobium
A_00545
N
0.650
MCOS_0000919201
Mesocestoides corti
MCOS_0000919201
N
0.631
SMTD_0000090701
Schistosoma mattheei
SMTD_0000090701
N
0.576
csin105999
Clonorchis sinensis
csin105999
I
0.573
T265_06704
Opisthorchis viverrini
T265_06704
I
0.573
DILT_0001316601
Diphyllobothrium latum
DILT_0001316601
N
0.570
DILT_0001785501
Diphyllobothrium latum
DILT_0001785501
N
0.568
SPER_0000914201
Spirometra erinaceieuropaei
SPER_0000914201
N
0.568
D915_11240
Fasciola hepatica
D915_11240
N
0.564
SPER_0001708101
Spirometra erinaceieuropaei
SPER_0001708101
N
0.544
SPER_0001952401
Spirometra erinaceieuropaei
SPER_0001952401
N
0.544
Sjc_0084710
Schistosoma japonicum
Sjc_0084710
N
0.539
PXEA_0000763901
Protopolystoma xenopodis
PXEA_0000763901
N
0.533
TTAC_0001064401
Hydatigera taeniaeformis
TTAC_0001064401
N
0.516
DILT_0001026601
Diphyllobothrium latum
DILT_0001026601
I
0.500
SSLN_0000478001
Schistocephalus solidus
SSLN_0000478001
I
0.500
HmN_000208300
Hymenolepis microstoma
HmN_000208300
I
0.472
HNAJ_0000300301
Hymenolepis nana
HNAJ_0000300301
I
0.472
ECANG7_10853
Echinococcus canadensis
ECANG7_10853
I
0.471
TASK_0001001001
Taenia asiatica
TASK_0001001001
I
0.471
TsM_000188900
Taenia solium
TsM_000188900
I
0.471
TTAC_0000238201
Hydatigera taeniaeformis
TTAC_0000238201
I
0.471
HDID_0000312901
Hymenolepis diminuta
HDID_0000312901
N
0.470
SSLN_0000478501
Schistocephalus solidus
SSLN_0000478501
I
0.468
HDID_0000236901
Hymenolepis diminuta
HDID_0000236901
I
0.466
HmN_000874900
Hymenolepis microstoma
HmN_000874900
I
0.466
HNAJ_0001105001
Hymenolepis nana
HNAJ_0001105001
I
0.466
TRIREDRAFT_54007
Trichoderma reesei
TRIREDRAFT_54007
N
0.464
ECANG7_06280
Echinococcus canadensis
ECANG7_06280
I
0.461
EmuJ_000232900
Echinococcus multilocularis
EmuJ_000232900
I
0.461
TASK_0000873701
Taenia asiatica
TASK_0000873701
I
0.461
TsM_000714900
Taenia solium
TsM_000714900
I
0.461
TTAC_0000092501
Hydatigera taeniaeformis
TTAC_0000092501
I
0.461
SMU15015648
Schmidtea mediterranea
SMU15015648
I
0.458
MCOS_0000670801
Mesocestoides corti
MCOS_0000670801
I
0.455
SPER_0001384501
Spirometra erinaceieuropaei
SPER_0001384501
I
0.454
SSLN_0001637801
Schistocephalus solidus
SSLN_0001637801
I
0.454
sox-2
Caenorhabditis elegans
WBGene00004949
I
0.446
SMU15030186
Schmidtea mediterranea
SMU15030186
N
0.443
CFIO01_04514
Colletotrichum fioriniae
CFIO01_04514
N
0.437
AOL_s00081g337
Arthrobotrys oligospora
AOL_s00081g337
N
0.432
DRE_00029
Drechslerella stenobrocha
DRE_00029
N
0.432
H072_9933
Dactylellina haptotyla
H072_9933
N
0.432
L798_12049
Zootermopsis nevadensis
L798_12049
I
0.429
SMU15001429
Schmidtea mediterranea
SMU15001429
I
0.426
SMU15001430
Schmidtea mediterranea
SMU15001430
I
0.426
ENSOARG00000000906
Ovis aries
ENSOARG00000000906
I
0.424
ENSPANG00000005859
Papio anubis
ENSPANG00000005859
I
0.424
ENSSTOG00000011011
Ictidomys tridecemlineatus
ENSSTOG00000011011
I
0.424
XP_002170844.1
Hydra magnipapillata
XP_002170844.1
I
0.424
ACOM029353
Anopheles coluzzii
ACOM029353
I
0.424
KLTH0F13926g
Lachancea thermotolerans
KLTH0F13926g
I
0.422
KLTH0F13926g
Kluyveromyces thermotolerans
KLTH0F13926g
I
0.422
Kwal_21061
Kluyveromyces waltii
Kwal_21061
I
0.422
MESCA012239
Megaselia scalaris
MESCA012239
I
0.418
Myotis_brandtii_SOX2_10019709
Myotis brandtii
Myotis_brandtii_SOX2_10019709
I
0.418
Ogr08337
Ophisaurus gracilis
Ogr08337
N
0.418
LDEC019307
Leptinotarsa decemlineata
LDEC019307
N
0.418
AMEC000538
Anopheles melas
AMEC000538
I
0.418
Hba_21281
Heterorhabditis bacteriophora
Hba_21281
N
0.418
GLOINDRAFT_323774
Rhizophagus irregularis
GLOINDRAFT_323774
N
0.416
Smp_076600
Schistosoma mansoni
Smp_076600
I
0.416
GPLIN_000970900
Globodera pallida
GPLIN_000970900
N
0.416
GPLIN_001405800
Globodera pallida
GPLIN_001405800
I
0.416