CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_323774
(
Rhizophagus irregularis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
GLOINDRAFT_323774
T330099_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA11522
Sox
58
107
LLITANISNAKISKLLAKMWRNETEEEKLYWKKIADRKKMEHVQAHPGYV
Links
Other
Sox
family TFs
Other
Rhizophagus irregularis
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPER_0001708101
Spirometra erinaceieuropaei
SPER_0001708101
N
0.549
SPER_0001952401
Spirometra erinaceieuropaei
SPER_0001952401
N
0.549
CFIO01_04514
Colletotrichum fioriniae
CFIO01_04514
N
0.540
SMU15030186
Schmidtea mediterranea
SMU15030186
N
0.529
TRE_0000259001
Trichobilharzia regenti
TRE_0000259001
N
0.529
AOL_s00081g337
Arthrobotrys oligospora
AOL_s00081g337
N
0.523
PFICI_02946
Pestalotiopsis fici
PFICI_02946
N
0.523
MESCA012239
Megaselia scalaris
MESCA012239
I
0.522
sox-2
Caenorhabditis elegans
WBGene00004949
I
0.522
Ogr08337
Ophisaurus gracilis
Ogr08337
N
0.522
LDEC019307
Leptinotarsa decemlineata
LDEC019307
N
0.522
Sjc_0107520
Schistosoma japonicum
Sjc_0107520
N
0.522
PPAI003639
Phlebotomus papatasi
PPAI003639
N
0.522
GPLIN_000970900
Globodera pallida
GPLIN_000970900
N
0.522
Hba_21281
Heterorhabditis bacteriophora
Hba_21281
N
0.522
PXEA_0002992801
Protopolystoma xenopodis
PXEA_0002992801
N
0.522
DRE_00029
Drechslerella stenobrocha
DRE_00029
N
0.516
H072_9933
Dactylellina haptotyla
H072_9933
N
0.516
PDIP_33190
Penicillium digitatum
PDIP_33190
N
0.513
PEX1_064750
Penicillium expansum
PEX1_064750
N
0.513
ENSPANG00000005859
Papio anubis
ENSPANG00000005859
I
0.512
Myotis_brandtii_SOX2_10019709
Myotis brandtii
Myotis_brandtii_SOX2_10019709
I
0.511
AMEC000538
Anopheles melas
AMEC000538
I
0.511
ENSSTOG00000011011
Ictidomys tridecemlineatus
ENSSTOG00000011011
I
0.505
csin108932
Clonorchis sinensis
csin108932
I
0.505
UCREL1_749
Eutypa lata
UCREL1_749
N
0.504
GPLIN_000596700
Globodera pallida
GPLIN_000596700
I
0.502
SOX8
Equus caballus
ENSECAG00000016320
I
0.499
PXEA_0000763901
Protopolystoma xenopodis
PXEA_0000763901
N
0.492
TTAC_0001064401
Hydatigera taeniaeformis
TTAC_0001064401
N
0.492
e_gw.60.194.1
Branchiostoma floridae
e_gw.60.194.1
N
0.491
ENSLOCG00000011834
Lepisosteus oculatus
ENSLOCG00000011834
I
0.490
GLOINDRAFT_83691
Rhizophagus irregularis
GLOINDRAFT_83691
N
0.489
K443DRAFT_58201
Laccaria amethystina
K443DRAFT_58201
N
0.487
LACBIDRAFT_169971
Laccaria bicolor
LACBIDRAFT_169971
N
0.487
ENSOARG00000000906
Ovis aries
ENSOARG00000000906
I
0.483
GLOTRDRAFT_8101
Gloeophyllum trabeum
GLOTRDRAFT_8101
N
0.480
SCLCIDRAFT_59496
Scleroderma citrinum
SCLCIDRAFT_59496
N
0.480
XP_002935940
Xenopus tropicalis
XP_002935940
N
0.480
ENSP00000322568
Macaca fascicularis
ENSP00000322568
I
0.477
ACOM029353
Anopheles coluzzii
ACOM029353
I
0.477
T265_14506
Opisthorchis viverrini
T265_14506
I
0.477
UCREL1_469
Eutypa lata
UCREL1_469
N
0.476
HMEL002398
Heliconius melpomene
HMEL002398
I
0.475
PLEOSDRAFT_1017219
Pleurotus ostreatus
PLEOSDRAFT_1017219
N
0.474
PSEUBRA_SCAF2g02551
Pseudozyma brasiliensis
PSEUBRA_SCAF2g02551
N
0.472
ENSOANG00000002448
Ornithorhynchus anatinus
ENSOANG00000002448
I
0.468
PTTG_00444
Puccinia triticina
PTTG_00444
N
0.466
BOTBODRAFT_575781
Botryobasidium botryosum
BOTBODRAFT_575781
N
0.463
Brh_R004116
Buceros rhinoceros
Brh_R004116
N
0.461
MESCA006364
Megaselia scalaris
MESCA006364
N
0.459
RPRC001038
Rhodnius prolixus
RPRC001038
N
0.459
AMEM007694
Anopheles merus
AMEM007694
N
0.459
HMEL006651
Heliconius melpomene
HMEL006651
I
0.458
GYMLUDRAFT_143012
Gymnopus luxurians
GYMLUDRAFT_143012
N
0.453
SOX2
Felis catus
ENSFCAG00000029205
I
0.452
SOX2
Procavia capensis
ENSPCAG00000003690
I
0.452
YQE_08562
Dendroctonus ponderosae
YQE_08562
N
0.452
A1O9_05704
Exophiala aquamarina
A1O9_05704
N
0.451
CNM02020
Cryptococcus neoformans
CNM02020
N
0.451
GLOINDRAFT_25375
Rhizophagus irregularis
GLOINDRAFT_25375
N
0.451
GLOINDRAFT_346686
Rhizophagus irregularis
GLOINDRAFT_346686
N
0.451
Afo_R012670
Aptenodytes forsteri
Afo_R012670
N
0.451
WALSEDRAFT_59420
Wallemia sebi
WALSEDRAFT_59420
N
0.449
fgenesh1_pg.C_scaffold_11000031
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_11000031
N
0.449
SERLA73DRAFT_139986
Serpula lacrymans
SERLA73DRAFT_139986
N
0.447
PLICRDRAFT_78649
Plicaturopsis crispa
PLICRDRAFT_78649
N
0.443
POSPLDRAFT_104634
Postia placenta
POSPLDRAFT_104634
N
0.442
sox5.S
Xenopus laevis
XB-GENE-865667
I
0.441
MCOS_0000919201
Mesocestoides corti
MCOS_0000919201
N
0.435
RPRC013413
Rhodnius prolixus
RPRC013413
N
0.434
gw.110.115.1
Branchiostoma floridae
gw.110.115.1
N
0.434
sox13.S
Xenopus laevis
XB-GENE-865496
I
0.434
GL15054
Drosophila persimilis
FBgn0152658
N
0.431
L798_05432
Zootermopsis nevadensis
L798_05432
N
0.430
sox9a
Tetraodon nigroviridis
ENSTNIG00000001901
N
0.427
WALSEDRAFT_27096
Wallemia sebi
WALSEDRAFT_27096
N
0.427
nAv.1.0.1.g07335
Acanthocheilonema viteae
nAv.1.0.1.g07335
N
0.427
maker-nMf.1.1.scaf00287-augustus-gene-0.13
Meloidogyne floridensis
maker-nMf.1.1.scaf00287-augustus-gene-0.13
I
0.426
MESCA006188
Megaselia scalaris
MESCA006188
N
0.423
CAA46607
Xenopus laevis
CAA46607
N
0.419
estExt_fgenesh1_kg.C_77250001
Phytophthora capsici
estExt_fgenesh1_kg.C_77250001
N
0.418
SOX12
Dasypus novemcinctus
ENSDNOG00000044763
N
0.417
Thaps7519
Thalassiosira pseudonana
Thaps7519
N
0.417
UCREL1_237
Eutypa lata
UCREL1_237
N
0.417
XP_002170844.1
Hydra magnipapillata
XP_002170844.1
I
0.416
D915_01276
Fasciola hepatica
D915_01276
N
0.416
ECPE_0001194001
Echinostoma caproni
ECPE_0001194001
N
0.416
SCUD_0001126301
Schistosoma curassoni
SCUD_0001126301
N
0.416
SMRZ_0002061501
Schistosoma margrebowiei
SMRZ_0002061501
N
0.416
SMTD_0001685201
Schistosoma mattheei
SMTD_0001685201
N
0.416