CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_kg.C_77250001
(
Phytophthora capsici
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
estExt_fgenesh1_kg.C_77250001
T335194_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_kg.C_77250001
Sox
4
58
SKRTELLETYQMSHNECSALCGRLWRQMHEEEREPYKRMAAEDKRRYEAELEIYN
Links
Other
Sox
family TFs
Other
Phytophthora capsici
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CaO19.1731
Candida albicans
CaO19.1731
N
0.468
CaO19.9299
Candida albicans
CaO19.9299
N
0.468
PLICRDRAFT_78649
Plicaturopsis crispa
PLICRDRAFT_78649
N
0.435
AWRI1499_3370
Brettanomyces bruxellensis
AWRI1499_3370
N
0.434
SERLA73DRAFT_139986
Serpula lacrymans
SERLA73DRAFT_139986
N
0.430
CC1G_05598
Coprinopsis cinerea
CC1G_05598
N
0.423
GLOINDRAFT_323774
Rhizophagus irregularis
GLOINDRAFT_323774
N
0.418