Prdm16 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000045913 T109250_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Prdm16
M08997_2.00 		Mus musculus
BBCYCTGGGR
YCCCAGRGVV		 Misc
Kulakovskiy et al.(2013)
PRD16_MOUSE.H11MO.0.B 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000064955 C2H2 ZF 98 120
ENSRNOP00000064955 C2H2 ZF 126 148
ENSRNOP00000064955 C2H2 ZF 154 177
ENSRNOP00000064955 C2H2 ZF 183 205
ENSRNOP00000064955 C2H2 ZF 211 233
ENSRNOP00000064955 C2H2 ZF 240 261
ENSRNOP00000064955 C2H2 ZF 767 789
ENSRNOP00000064955 C2H2 ZF 795 818
ENSRNOP00000064955 C2H2 ZF 824 846
ENSRNOP00000067712 C2H2 ZF 98 120
ENSRNOP00000067712 C2H2 ZF 126 148
ENSRNOP00000067712 C2H2 ZF 154 177
ENSRNOP00000067712 C2H2 ZF 183 205
ENSRNOP00000067712 C2H2 ZF 211 233
ENSRNOP00000067712 C2H2 ZF 240 261
ENSRNOP00000067712 C2H2 ZF 767 789
ENSRNOP00000067712 C2H2 ZF 795 818
ENSRNOP00000067712 C2H2 ZF 824 846
ENSRNOP00000068014 C2H2 ZF 98 120
ENSRNOP00000068014 C2H2 ZF 126 148
ENSRNOP00000068014 C2H2 ZF 154 177
ENSRNOP00000068014 C2H2 ZF 183 205
ENSRNOP00000068014 C2H2 ZF 211 233
ENSRNOP00000068014 C2H2 ZF 240 261
ENSRNOP00000068014 C2H2 ZF 768 790
ENSRNOP00000068014 C2H2 ZF 796 819
ENSRNOP00000068014 C2H2 ZF 825 847
ENSRNOP00000068441 C2H2 ZF 98 120
ENSRNOP00000068441 C2H2 ZF 126 148
ENSRNOP00000068441 C2H2 ZF 154 177
ENSRNOP00000068441 C2H2 ZF 183 205
ENSRNOP00000068441 C2H2 ZF 211 233
ENSRNOP00000068441 C2H2 ZF 240 261
ENSRNOP00000068441 C2H2 ZF 768 790
ENSRNOP00000068441 C2H2 ZF 796 819
ENSRNOP00000068441 C2H2 ZF 825 847

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRDM16 Danio rerio ENSDARG00000078324 I 0.804
ENSMPUG00000007479 Mustela putorius furo ENSMPUG00000007479 I 0.814
Prdm16 Mus musculus ENSMUSG00000039410 D 0.827
PRDM16 Pan troglodytes ENSPTRG00000000059 I 0.823
Pvit_15789 Pogona vitticeps Pvit_15789 I 0.825