CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Zik1 *(Rattus norvegicus)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	ENSRNOG00000055843	T109339_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ZIK1 M07633_2.00	Homo sapiens	VNNWYBYNKTGCYWTTGYYHY	RDRRCAAWRGCAMNRVRWNNB	ChIP-seq+ChIP-exo Barazandeh et al.(2018) ZIK1.RCADE.ReprocessedData	0.807	0.932
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

Links
Other C2H2 ZF family TFs
Other *Rattus norvegicus* TFs

12 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
CFIO01_11141	Colletotrichum fioriniae	CFIO01_11141	N	0.000
CH063_10692	Colletotrichum higginsianum	CH063_10692	N	0.000
Cob_04961	Colletotrichum orbiculare	Cob_04961	N	0.000
estExt_Genewise1.C_42033	Cryphonectria parasitica	estExt_Genewise1.C_42033	N	0.000
FOXG_14560	Fusarium oxysporum	FOXG_14560	N	0.000
GGTG_13186	Gaeumannomyces graminis	GGTG_13186	N	0.000
MAPG_08844	Magnaporthe poae	MAPG_08844	N	0.000
MAC_07656	Metarhizium acridum	MAC_07656	N	0.000
MBR_00024	Metarhizium brunneum	MBR_00024	N	0.000
MGU_09181	Metarhizium guizhouense	MGU_09181	N	0.000
MAJ_09002	Metarhizium majus	MAJ_09002	N	0.000
X797_009923	Metarhizium robertsii	X797_009923	N	0.000
S40285_06609	Stachybotrys chlorohalonata	S40285_06609	N	0.000
TRIATDRAFT_164285	Trichoderma atroviride	TRIATDRAFT_164285	N	0.000
TRIREDRAFT_104104	Trichoderma reesei	TRIREDRAFT_104104	N	0.000
TRIREDRAFT_109328	Trichoderma reesei	TRIREDRAFT_109328	N	0.000
TRIVIDRAFT_125398	Trichoderma virens	TRIVIDRAFT_125398	N	0.000