ENSSTOG00000016168 (Ictidomys tridecemlineatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSTOG00000016168 T110798_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM4
M02881_2.00 		Homo sapiens
TTTCAAGGCCCCC
GGGGGCCTTGAAA		 SELEX
Jolma et al.(2013)
PRDM4_1 		0.827 1.000
PRDM4
M04421_2.00 		Homo sapiens
YRRCNGTTTCAAGKCYMCCC
GGGKRGMCTTGAAACNGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_HT-SELEX 		0.827 1.000
PRDM4
M04422_2.00 		Homo sapiens
YRGCRGTTTCRAGGSTTVCC
GGBAASCCTYGAAACYGCYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_1 		0.827 1.000
PRDM4
M04423_2.00 		Homo sapiens
YRRCRGTTTCRAGKSYNCCC
GGGNRSMCTYGAAACYGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_2 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000014476 C2H2 ZF 593 615
ENSSTOP00000014476 C2H2 ZF 621 643
ENSSTOP00000014476 C2H2 ZF 649 671
ENSSTOP00000014476 C2H2 ZF 677 699
ENSSTOP00000014476 C2H2 ZF 705 727
ENSSTOP00000014476 C2H2 ZF 733 754

Links

Other C2H2 ZF family TFs
Other Ictidomys tridecemlineatus TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASTEI06918 Anopheles stephensi ASTEI06918 N 0.000
ALUE_0001497801 Ascaris lumbricoides ALUE_0001497801 I 0.000
BGLB013824 Biomphalaria glabrata BGLB013824 I 0.000
DBX1 Callithrix jacchus ENSCJAG00000006734 I 0.000
Cmyd_10012400 Chelonia mydas Cmyd_10012400 I 0.000
CLEC007171 Cimex lectularius CLEC007171 I 0.000
Dbx1 Dipodomys ordii ENSDORG00000009286 N 0.000
DBX1 Echinops telfairi ENSETEG00000017576 N 0.000
DBX1 Gorilla gorilla ENSGGOG00000014848 N 0.000
TTAC_0000701101 Hydatigera taeniaeformis TTAC_0000701101 N 0.000
HDID_0000333701 Hymenolepis diminuta HDID_0000333701 N 0.000
nLs.2.1.2.g05836 Litomosoides sigmodontis nLs.2.1.2.g05836 I 0.000
MCOS_0000655901 Mesocestoides corti MCOS_0000655901 N 0.000
DBX1 Microcebus murinus ENSMICG00000017111 N 0.000
ENSNLEG00000017811 Nomascus leucogenys ENSNLEG00000017811 N 0.000
DBX1 Ochotona princeps ENSOPRG00000012954 N 0.000
Ogr00185 Ophisaurus gracilis Ogr00185 N 0.000
T265_02852 Opisthorchis viverrini T265_02852 I 0.000
DBX1 Pan troglodytes ENSPTRG00000003437 N 0.000
ENSPPYG00000003422 Pongo abelii ENSPPYG00000003422 N 0.000
DBX1 Procavia capensis ENSPCAG00000004905 N 0.000
SROB_0001564301 Schistosoma rodhaini SROB_0001564301 I 0.000
meox1 Takifugu rubripes ENSTRUG00000005193 I 0.000
ENSTSYG00000000516 Tarsius syrichta ENSTSYG00000000516 I 0.000
TELCIR_07728 Teladorsagia circumcincta TELCIR_07728 I 0.000
DBX1 Tursiops truncatus ENSTTRG00000000318 N 0.000
L798_06393 Zootermopsis nevadensis L798_06393 I 0.000