PRDM6 (Takifugu rubripes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTRUG00000011582 T112383_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM6
M08277_2.00 		Homo sapiens
TTTTYYWBHHTTTYYHYTBYN
NRVARDRRAAADDVWRRAAAA		 ChIP-seq
Schmitges et al.(2016)
Q9NQX0.MEME 		0.762 0.966
PRDM6
M08855_2.00 		Homo sapiens
NNKTTTTCYYBYB
VRVRRGAAAAMNN		 Misc
Kulakovskiy et al.(2013)
PRDM6_HUMAN.H11MO.0.C 		0.762 0.966
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000029271 C2H2 ZF 479 499
ENSTRUP00000029271 C2H2 ZF 507 529
ENSTRUP00000029271 C2H2 ZF 535 557
ENSTRUP00000029271 C2H2 ZF 563 584

Links

Other C2H2 ZF family TFs
Other Takifugu rubripes TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015711 Ailuropoda melanoleuca ENSAMEG00000015711 I 0.762
Alligator_sinensis_CCG004791.1 Alligator sinensis Alligator_sinensis_CCG004791.1 I 0.762
PRDM6 Anolis carolinensis ENSACAG00000003401 I 0.762
ENSAMXG00000012588 Astyanax mexicanus ENSAMXG00000012588 I 0.762
ENSBTAP00000027421-D1 Bos grunniens ENSBTAP00000027421-D1 I 0.762
PRDM6 Bos taurus ENSBTAG00000020578 I 0.762
PRDM6 Callithrix jacchus ENSCJAG00000017318 I 0.762
PRDM6 Canis familiaris ENSCAFG00000023666 I 0.762
ENSCPOG00000004258 Cavia porcellus ENSCPOG00000004258 I 0.762
ENSCSAG00000014599 Chlorocebus sabaeus ENSCSAG00000014599 I 0.762
PRDM6 Choloepus hoffmanni ENSCHOG00000003085 I 0.762
PRDM6 Dasypus novemcinctus ENSDNOG00000006337 I 0.762
PRDM6 Equus caballus ENSECAG00000004532 I 0.762
PRDM6 Erinaceus europaeus ENSEEUG00000005543 I 0.762
PRDM6 Felis catus ENSFCAG00000026249 I 0.762
ENSFALG00000007522 Ficedula albicollis ENSFALG00000007522 I 0.762
PRDM6 Gallus gallus ENSGALG00000005351 I 0.762
PRDM6 Homo sapiens ENSG00000061455 D 0.762
ENSLOCG00000008663 Lepisosteus oculatus ENSLOCG00000008663 I 0.762
PRDM6 Loxodonta africana ENSLAFG00000000396 I 0.762
ENSP00000261364 Macaca fascicularis ENSP00000261364 I 0.762
ENSMMUG00000010652 Macaca mulatta ENSMMUG00000010652 I 0.762
ENSMEUG00000011470 Macropus eugenii ENSMEUG00000011470 I 0.762
ENSMICG00000007754 Microcebus murinus ENSMICG00000007754 I 0.762
PRDM6 Monodelphis domestica ENSMODG00000013415 I 0.762
ENSMPUG00000012965 Mustela putorius furo ENSMPUG00000012965 I 0.762
Prdm6 Mus musculus ENSMUSG00000069378 I 0.762
Myotis_brandtii_PRDM6_10015768 Myotis brandtii Myotis_brandtii_PRDM6_10015768 I 0.762
PRDM6 Myotis lucifugus ENSMLUG00000010064 I 0.762
ENSNLEG00000012064 Nomascus leucogenys ENSNLEG00000012064 I 0.762
PRDM6 Ochotona princeps ENSOPRG00000004020 I 0.762
Ogr18847 Ophisaurus gracilis Ogr18847 I 0.762
ENSONIG00000013818 Oreochromis niloticus ENSONIG00000013818 I 0.772
ENSOANG00000001527 Ornithorhynchus anatinus ENSOANG00000001527 I 0.762
PRDM6 Oryctolagus cuniculus ENSOCUG00000003454 I 0.762
ENSORLG00000017089 Oryzias latipes ENSORLG00000017089 I 0.772
ENSOARG00000018873 Ovis aries ENSOARG00000018873 I 0.762
PRDM6 Pan troglodytes ENSPTRG00000017180 I 0.762
ENSPANG00000020936 Papio anubis ENSPANG00000020936 I 0.762
ENSPSIG00000007714 Pelodiscus sinensis ENSPSIG00000007714 I 0.762
ENSPFOG00000000918 Poecilia formosa ENSPFOG00000000918 I 0.772
Pvit_11059 Pogona vitticeps Pvit_11059 I 0.762
PRDM6 Pteropus vampyrus ENSPVAG00000006781 I 0.762
Prdm6 Rattus norvegicus ENSRNOG00000030486 I 0.762
ENSSHAG00000009542 Sarcophilus harrisii ENSSHAG00000009542 I 0.762
PRDM6 Sus scrofa ENSSSCG00000014238 I 0.762
ENSTSYG00000009407 Tarsius syrichta ENSTSYG00000009407 I 0.762
ENSTNIG00000004450 Tetraodon nigroviridis ENSTNIG00000004450 I 0.827
PRDM6 Tupaia belangeri ENSTBEG00000010088 I 0.762
PRDM6 Tursiops truncatus ENSTTRG00000006808 I 0.762
prdm6 Xenopus tropicalis XB-GENE-854907 I 0.762