CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GM21256
(
Drosophila sechellia
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0176137
T116143_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
shn
M06068_2.00
Drosophila melanogaster
KGGAATYCCCT
AGGGRATTCCM
B1H
Zhu et al.(2011)
shn-F1-2_SANGER_5_FBgn0003396
0.825
0.988
shn
M09663_2.00
Drosophila melanogaster
TGWTTWKMYTGSKT
AMSCARKMWAAWCA
Misc
Kulakovskiy et al.(2009)
shn
0.825
0.988
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0202733
C2H2 ZF
473
495
YVCQYCNLICAKPSVLEKHIRAH
FBpp0202733
C2H2 ZF
501
525
YPCDTCGIAFKTKSNLYKHCRSRSH
FBpp0202733
C2H2 ZF
1812
1834
YVCSECGIRCKKPSMLKKHIRTH
FBpp0202733
C2H2 ZF
1840
1864
FTCSHCNFSFKTKGNLTKHMQSKTH
FBpp0202733
C2H2 ZF
2303
2324
TCTICTKTFQRQHQLTLHMNIH
FBpp0202733
C2H2 ZF
2330
2354
FKCEPCSISFRTQGHLQKHERSEAH
FBpp0202733
C2H2 ZF
2375
2399
FECTDCKIAFRIHGHLAKHLRSKTH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila sechellia
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB004285
Anopheles albimanus
AALB004285
N
AARA007512
Anopheles arabiensis
AARA007512
N
AATE004774
Anopheles atroparvus
AATE004774
N
ACHR007391
Anopheles christyi
ACHR007391
N
ACOM024834
Anopheles coluzzii
ACOM024834
N
ACUA003372
Anopheles culicifacies
ACUA003372
N
ADAC007389
Anopheles darlingi
ADAC007389
N
ADIR007452
Anopheles dirus
ADIR007452
N
AFAF003938
Anopheles farauti
AFAF003938
N
AFUN010686
Anopheles funestus
AFUN010686
N
AGAP006014
Anopheles gambiae
AGAP006014
N
AMAM005766
Anopheles maculatus
AMAM005766
N
AMEC010956
Anopheles melas
AMEC010956
N
AMEM006157
Anopheles merus
AMEM006157
N
AMIN010929
Anopheles minimus
AMIN010929
N
AQUA005653
Anopheles quadriannulatus
AQUA005653
N
ASIS011213
Anopheles sinensis
ASIS011213
N
BGIBMGA010886
Bombyx mori
BGIBMGA010886
N
YQE_11778
Dendroctonus ponderosae
YQE_11778
N