CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GM21256
(
Drosophila sechellia
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0176137
T116143_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
shn
M06068_2.00
Drosophila melanogaster
KGGAATYCCCT
AGGGRATTCCM
B1H
Zhu et al.(2011)
shn-F1-2_SANGER_5_FBgn0003396
0.825
0.988
shn
M09663_2.00
Drosophila melanogaster
TGWTTWKMYTGSKT
AMSCARKMWAAWCA
Misc
Kulakovskiy et al.(2009)
shn
0.825
0.988
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0202733
C2H2 ZF
473
495
YVCQYCNLICAKPSVLEKHIRAH
FBpp0202733
C2H2 ZF
501
525
YPCDTCGIAFKTKSNLYKHCRSRSH
FBpp0202733
C2H2 ZF
1812
1834
YVCSECGIRCKKPSMLKKHIRTH
FBpp0202733
C2H2 ZF
1840
1864
FTCSHCNFSFKTKGNLTKHMQSKTH
FBpp0202733
C2H2 ZF
2303
2324
TCTICTKTFQRQHQLTLHMNIH
FBpp0202733
C2H2 ZF
2330
2354
FKCEPCSISFRTQGHLQKHERSEAH
FBpp0202733
C2H2 ZF
2375
2399
FECTDCKIAFRIHGHLAKHLRSKTH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila sechellia
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GD10771
Drosophila simulans
FBgn0182535
I
0.826
GE12857
Drosophila yakuba
FBgn0230576
I
0.826
shn
Drosophila melanogaster
FBgn0003396
D
0.825
GA24085
Drosophila pseudoobscura
FBgn0245484
I
0.824
GG20167
Drosophila erecta
FBgn0112361
I
0.823
GF12526
Drosophila ananassae
FBgn0089563
I
0.822
GI19779
Drosophila mojavensis
FBgn0142516
I
0.815
GK20953
Drosophila willistoni
FBgn0222945
I
0.809
GH21290
Drosophila grimshawi
FBgn0128752
I
0.805
MDOA002894
Musca domestica
MDOA002894
I
0.761
LCUP002151
Lucilia cuprina
LCUP002151
I
0.759