CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GH21290
(
Drosophila grimshawi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0128752
T115431_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
shn
M06068_2.00
Drosophila melanogaster
KGGAATYCCCT
AGGGRATTCCM
B1H
Zhu et al.(2011)
shn-F1-2_SANGER_5_FBgn0003396
0.805
0.950
shn
M09663_2.00
Drosophila melanogaster
TGWTTWKMYTGSKT
AMSCARKMWAAWCA
Misc
Kulakovskiy et al.(2009)
shn
0.805
0.950
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0155196
C2H2 ZF
497
518
KCPYCNLICAKPSVLEKHIRAH
FBpp0155196
C2H2 ZF
524
548
YPCNNCGIAFKTKSNLYKHCRSRSH
FBpp0155196
C2H2 ZF
2005
2027
YVCSECGIRCKKPSMLKKHIRTH
FBpp0155196
C2H2 ZF
2033
2057
FTCSHCSFSFKTKGNLTKHMQSKTH
FBpp0155196
C2H2 ZF
2550
2571
TCTVCNKTFQRTHQLTLHMNIH
FBpp0155196
C2H2 ZF
2577
2601
FKCEPCSISFRTQGHLQKHERSEAH
FBpp0155196
C2H2 ZF
2622
2646
FECTDCKIAFRIHGHLAKHLRSKTH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila grimshawi
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GG20167
Drosophila erecta
FBgn0112361
I
0.810
GE12857
Drosophila yakuba
FBgn0230576
I
0.807
shn
Drosophila melanogaster
FBgn0003396
D
0.805
GF12526
Drosophila ananassae
FBgn0089563
I
0.805
GM21256
Drosophila sechellia
FBgn0176137
I
0.805
GD10771
Drosophila simulans
FBgn0182535
I
0.805
GA24085
Drosophila pseudoobscura
FBgn0245484
I
0.805
GI19779
Drosophila mojavensis
FBgn0142516
I
0.800
GK20953
Drosophila willistoni
FBgn0222945
I
0.800
LCUP002151
Lucilia cuprina
LCUP002151
I
0.758