CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GM22706
(
Drosophila sechellia
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0177576
T116160_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
vfl
M06166_2.00
Drosophila melanogaster
CTACCTGM
KCAGGTAG
B1H
Zhu et al.(2011)
vfl_SANGER_5_FBgn0259789
0.827
1.000
vfl
M06167_2.00
Drosophila melanogaster
NNNCTACCTGMNNNN
NNNNKCAGGTAGNNN
B1H
Zhu et al.(2011)
vfl_SOLEXA_5_FBgn0259789
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0204183
C2H2 ZF
1295
1318
IKCLECDKEFTKNCYLTQHNKSFH
FBpp0204183
C2H2 ZF
1324
1346
FRCQKCGKRFQSEDVYTTHLGRH
FBpp0204183
C2H2 ZF
1353
1376
HKCELCPKQFHHKTDLRRHVEAIH
FBpp0204183
C2H2 ZF
1382
1404
HMCDICEKGFCRKDHLRKHLETH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila sechellia
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GF20463
Drosophila ananassae
FBgn0097470
I
0.822
GG18021
Drosophila erecta
FBgn0110239
I
0.827
vfl
Drosophila melanogaster
FBgn0259789
D
0.827
GI15246
Drosophila mojavensis
FBgn0137995
I
0.827
GL12930
Drosophila persimilis
FBgn0150536
I
0.827
GA22861
Drosophila pseudoobscura
FBgn0244263
I
0.827
GK16344
Drosophila willistoni
FBgn0218346
I
0.827
GE17353
Drosophila yakuba
FBgn0234824
I
0.827