CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GK11610
(
Drosophila willistoni
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0213621
T116697_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
lmd
M00564_2.00
Drosophila melanogaster
NNCCCCCCVS
SBGGGGGGNN
PBM
Busser et al.(2012b)
Lmd
0.822
0.956
lmd
M03702_2.00
Drosophila melanogaster
BVCCCCCCRCNDHSH
DSDHNGYGGGGGGBV
SELEX
Nitta et al.(2015)
lmd_1
0.822
0.956
lmd
M06157_2.00
Drosophila melanogaster
MVKVCCCCCYRCNG
CNGYRGGGGGBMBK
B1H
Zhu et al.(2011)
lmd_SANGER_5_FBgn0039039
0.822
0.956
lmd
M06158_2.00
Drosophila melanogaster
NNNMCCCCCYRSNRN
NYNSYRGGGGGKNNN
B1H
Zhu et al.(2011)
lmd_SOLEXA_5_FBgn0039039
0.822
0.956
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0240753
C2H2 ZF
419
444
LICQWTDCNEEFPNQQAFVEHIEKCH
FBpp0240753
C2H2 ZF
453
480
FSCFWLDCPRRYKPFNARYKLLIHMRVH
FBpp0240753
C2H2 ZF
487
510
KCPFPGCNKAFSRLENLKIHQRSH
FBpp0240753
C2H2 ZF
516
540
YGCQYGGCVKAFSNSSDRAKHQRTH
FBpp0240753
C2H2 ZF
546
570
YACQLPGCTKRYTDPSSLRKHVKNH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila willistoni
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GF18275
Drosophila ananassae
FBgn0095293
I
0.779
GG12470
Drosophila erecta
FBgn0104758
I
0.822
lmd
Drosophila melanogaster
FBgn0039039
D
0.822
GL27360
Drosophila persimilis
FBgn0164941
I
0.822
GA18349
Drosophila pseudoobscura
FBgn0078354
I
0.822
GM23601
Drosophila sechellia
FBgn0178466
I
0.822
GD18414
Drosophila simulans
FBgn0189939
I
0.822
GE23994
Drosophila yakuba
FBgn0241136
I
0.822