GA22861 (Drosophila pseudoobscura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0244263 T117136_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
vfl
M06166_2.00 		Drosophila melanogaster
CTACCTGM
KCAGGTAG		 B1H
Zhu et al.(2011)
vfl_SANGER_5_FBgn0259789 		0.827 1.000
vfl
M06167_2.00 		Drosophila melanogaster
NNNCTACCTGMNNNN
NNNNKCAGGTAGNNN		 B1H
Zhu et al.(2011)
vfl_SOLEXA_5_FBgn0259789 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0273167 C2H2 ZF 1429 1452
FBpp0273167 C2H2 ZF 1458 1480
FBpp0273167 C2H2 ZF 1487 1510
FBpp0273167 C2H2 ZF 1516 1538

Links

Other C2H2 ZF family TFs
Other Drosophila pseudoobscura TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR07G06910 Leersia perrieri LPERR07G06910 N
ORGLA03G0357200 Oryza glaberrima ORGLA03G0357200 N
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I
OMERI03G35820 Oryza meridionalis OMERI03G35820 I
ONIVA03G25220 Oryza nivara ONIVA03G25220 I
ONIVA03G40610 Oryza nivara ONIVA03G40610 I
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I