fgenesh2_kg.5__981__AT3G46090.1 (Arabidopsis lyrata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 fgenesh2_kg.5__981__AT3G46090.1 T117365_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.827 0.978
AT3G46070
M06813_2.00 		Arabidopsis thaliana
HYHHYHTCACTYHHH
DDDRAGTGADRDDRD		 Dap-seq
OMalley et al.(2016)
AT3G46070_col_a 		0.792 0.848
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.772 0.761
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.771 0.761
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.771 0.761
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.761 0.717
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.761 0.717
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.5__981__AT3G46090.1 C2H2 ZF 39 61
fgenesh2_kg.5__981__AT3G46090.1 C2H2 ZF 87 109

Links

Other C2H2 ZF family TFs
Other Arabidopsis lyrata TFs

368 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_03169 Arthroderma benhamiae ARB_03169 I
MCYG_03787 Arthroderma otae MCYG_03787 I
fgenesh1_pg.00083_#_673 Aspergillus carbonarius fgenesh1_pg.00083_#_673 I
ACLA_024940 Aspergillus clavatus CADACLAG00003063 I
CADAFLAG00008334 Aspergillus flavus CADAFLAG00008334 I
AFUA_1G10580 Aspergillus fumigatus CADAFUAG00007238 I
ANIA_01217 Aspergillus nidulans CADANIAG00001407 D
CADANGAG00006576 Aspergillus niger CADANGAG00006576 I
CADAORAG00009146 Aspergillus oryzae CADAORAG00009146 I
EURHEDRAFT_518531 Aspergillus ruber EURHEDRAFT_518531 I
BDDG_03637 Blastomyces dermatitidis BDDG_03637 I
BGHDH14_bgh05591 Blumeria graminis BGHDH14_bgh05591 I
Bcin11g02190 Botrytis cinerea Bcin11g02190 I
PVAR5_8900 Byssochlamys spectabilis PVAR5_8900 I
A1O1_04236 Capronia coronata A1O1_04236 I
A1O3_01186 Capronia epimyces A1O3_01186 I
PV04_02769 Capronia semiimmersa PV04_02769 I
CHGG_00810 Chaetomium globosum CHGG_00810 I
CTHT_0059940 Chaetomium thermophilum CTHT_0059940 I
Ciclev10024310m.g Citrus clementina Ciclev10024310m.g I
Z519_09403 Cladophialophora bantiana Z519_09403 I
G647_05771 Cladophialophora carrionii G647_05771 I
PV07_01540 Cladophialophora immunda PV07_01540 I
A1O5_08179 Cladophialophora psammophila A1O5_08179 I
A1O7_02602 Cladophialophora yegresii A1O7_02602 I
CIMG_08965 Coccidioides immitis CIMG_08965 I
CPC735_014230 Coccidioides posadasii CPC735_014230 I
CFIO01_10925 Colletotrichum fioriniae CFIO01_10925 I
CGGC5_1994 Colletotrichum gloeosporioides CGGC5_1994 I
GLRG_03912 Colletotrichum graminicola GLRG_03912 I
CH063_15703 Colletotrichum higginsianum CH063_15703 I
Cob_01690 Colletotrichum orbiculare Cob_01690 I
CSUB01_02350 Colletotrichum sublineola CSUB01_02350 I
HMPREF1541_00873 Cyphellophora europaea HMPREF1541_00873 I
EPUS_07013 Endocarpon pusillum EPUS_07013 I
EV44_g4453 Erysiphe necator EV44_g4453 I
A1O9_06998 Exophiala aquamarina A1O9_06998 I
HMPREF1120_08383 Exophiala dermatitidis HMPREF1120_08383 I
PV10_01375 Exophiala mesophila PV10_01375 I
PV06_07565 Exophiala oligosperma PV06_07565 I
PV11_05046 Exophiala sideris PV11_05046 I
PV08_07787 Exophiala spinifera PV08_07787 I
PV08_07384 Exophiala spinifera PV08_07384 I
PV05_06344 Exophiala xenobiotica PV05_06344 I
Z517_04522 Fonsecaea pedrosoi Z517_04522 I
CMQ_8059 Grosmannia clavigera CMQ_8059 I
HCBG_03212 Histoplasma capsulatum HCBG_03212 I
MGG_00184 Magnaporthe oryzae MGG_00184 I
MBM_05757 Marssonina brunnea MBM_05757 I
MCYG_03787 Microsporum canis MCYG_03787 I
MGYG_03394 Microsporum gypseum MGYG_03394 I
MYCTH_2296328 Myceliophthora thermophila MYCTH_2296328 I
NFIA_015070 Neosartorya fischeri CADNFIAG00000868 I
NCU03070 Neurospora crassa NCU03070 D
estExt_fgenesh2_pg.C_70450 Neurospora discreta estExt_fgenesh2_pg.C_70450 I
NEUTE1DRAFT_91411 Neurospora tetrasperma NEUTE1DRAFT_91411 I
OIDMADRAFT_196475 Oidiodendron maius OIDMADRAFT_196475 I
F503_02324 Ophiostoma piceae uamh F503_02324 I
PABG_03356 Paracoccidioides brasiliensis PABG_03356 I
PAAG_02895 Paracoccidioides sp lutzii PAAG_02895 I
Pc16g04210 Penicillium chrysogenum Pc16g04210 I
PDIP_31370 Penicillium digitatum PDIP_31370 I
PEX1_030790 Penicillium expansum PEX1_030790 I
PITC_039850 Penicillium italicum PITC_039850 I
PMAA_043800 Penicillium marneffei PMAA_043800 I
PDE_07199 Penicillium oxalicum PDE_07199 I
PCH_Pc16g04210 Penicillium rubens PCH_Pc16g04210 I
U727_00434030131 Penicillium solitum U727_00434030131 I
PFICI_01477 Pestalotiopsis fici PFICI_01477 I
PODANS_1_12070 Podospora anserina PODANS_1_12070 I
GMDG_04263 Pseudogymnoascus destructans GMDG_04263 I
V499_07400 Pseudogymnoascus pannorum V499_07400 I
Z518_01899 Rhinocladiella mackenziei Z518_01899 I
SBOR_9020 Sclerotinia borealis SBOR_9020 I
SS1G_01567 Sclerotinia sclerotiorum SS1G_01567 I
SMAC_02800 Sordaria macrospora SMAC_02800 I
SPBR_04777 Sporothrix brasiliensis SPBR_04777 I
HMPREF1624_05238 Sporothrix schenckii HMPREF1624_05238 I
PMAA_043800 Talaromyces marneffei PMAA_043800 I
TSTA_074790 Talaromyces stipitatus TSTA_074790 I
THITE_2113433 Thielavia terrestris THITE_2113433 I
TEQG_04003 Trichophyton equinum TEQG_04003 I
H101_06311 Trichophyton interdigitale H101_06311 I
H102_03894 Trichophyton rubrum H102_03894 I
TESG_07530 Trichophyton tonsurans TESG_07530 I
TRV_02965 Trichophyton verrucosum TRV_02965 I
UREG_03403 Uncinocarpus reesii UREG_03403 I