Ciclev10024310m.g (Citrus clementina)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ciclev10024310m.g T228413_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANIA_01217
M02056_2.00 		Aspergillus nidulans
NWTATHDNNN
NNNHDATAWN		 PBM
Weirauch et al.(2014)
pTH5818 		0.603 0.439
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10024310m Homeodomain 68 124

Links

Other Homeodomain family TFs
Other Citrus clementina TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PV08_07384 Exophiala spinifera PV08_07384 I 0.621
CIMG_08965 Coccidioides immitis CIMG_08965 I 0.603
MCYG_03787 Microsporum canis MCYG_03787 I 0.603
A1O9_06998 Exophiala aquamarina A1O9_06998 I 0.603
ARB_03169 Arthroderma benhamiae ARB_03169 I 0.603
BDDG_03637 Blastomyces dermatitidis BDDG_03637 I 0.603
ACLA_024940 Aspergillus clavatus CADACLAG00003063 I 0.603
CADAFLAG00008334 Aspergillus flavus CADAFLAG00008334 I 0.603
AFUA_1G10580 Aspergillus fumigatus CADAFUAG00007238 I 0.603
CADANGAG00006576 Aspergillus niger CADANGAG00006576 I 0.603
ANIA_01217 Aspergillus nidulans CADANIAG00001407 D 0.603
CADAORAG00009146 Aspergillus oryzae CADAORAG00009146 I 0.603
NFIA_015070 Neosartorya fischeri CADNFIAG00000868 I 0.603
CPC735_014230 Coccidioides posadasii CPC735_014230 I 0.603
EPUS_07013 Endocarpon pusillum EPUS_07013 I 0.603
EURHEDRAFT_518531 Aspergillus ruber EURHEDRAFT_518531 I 0.603
H101_06311 Trichophyton interdigitale H101_06311 I 0.603
H102_03894 Trichophyton rubrum H102_03894 I 0.603
H105_03921 Trichophyton soudanense H105_03921 I 0.603
HCBG_03212 Histoplasma capsulatum HCBG_03212 I 0.603
HMPREF1541_00873 Cyphellophora europaea HMPREF1541_00873 I 0.603
MCYG_03787 Arthroderma otae MCYG_03787 I 0.603
MGYG_03394 Microsporum gypseum MGYG_03394 I 0.603
PAAG_02895 Paracoccidioides sp lutzii PAAG_02895 I 0.603
PABG_03356 Paracoccidioides brasiliensis PABG_03356 I 0.603
PCH_Pc16g04210 Penicillium rubens PCH_Pc16g04210 I 0.603
PDE_07199 Penicillium oxalicum PDE_07199 I 0.603
PDIP_31370 Penicillium digitatum PDIP_31370 I 0.603
PEX1_030790 Penicillium expansum PEX1_030790 I 0.603
PITC_039850 Penicillium italicum PITC_039850 I 0.603
PMAA_043800 Talaromyces marneffei PMAA_043800 I 0.603
PV10_01375 Exophiala mesophila PV10_01375 I 0.603
PVAR5_8900 Byssochlamys spectabilis PVAR5_8900 I 0.603
TEQG_04003 Trichophyton equinum TEQG_04003 I 0.603
TESG_07530 Trichophyton tonsurans TESG_07530 I 0.603
TRV_02965 Trichophyton verrucosum TRV_02965 I 0.603
TSTA_074790 Talaromyces stipitatus TSTA_074790 I 0.603
U727_00434030131 Penicillium solitum U727_00434030131 I 0.603
UREG_03403 Uncinocarpus reesii UREG_03403 I 0.603
fgenesh1_pg.00083_#_673 Aspergillus carbonarius fgenesh1_pg.00083_#_673 I 0.603
Pc16g04210 Penicillium chrysogenum Pc16g04210 I 0.603
PMAA_043800 Penicillium marneffei PMAA_043800 I 0.603
M408DRAFT_281141 Serendipita vermifera M408DRAFT_281141 N 0.602