CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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id1
(
Zea mays
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GRMZM2G011357
T118558_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
id1
M02672_2.00
Zea mays
TBKYYBYTHBYG
CRVDARVRRMVA
SELEX
Mathelier et al.(2014)
MA0120.1
(Direct)
(Direct)
id1
M10380_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ID1_01
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G011357_P01
C2H2 ZF
197
218
WCCERCGKRYAVQSDWKAHVKG
GRMZM2G011357_P01
C2H2 ZF
219
243
CGTREYRCDCGILFSRKDSLLTHRA
Links
Other
C2H2 ZF
family TFs
Other
Zea mays
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000016669
Ailuropoda melanoleuca
ENSAMEG00000016669
I
Alligator_sinensis_CCG012901.1
Alligator sinensis
Alligator_sinensis_CCG012901.1
I
ENSAPLG00000006054
Anas platyrhynchos
ENSAPLG00000006054
I
MYRF
Anolis carolinensis
ENSACAG00000017691
I
Afo_R010549
Aptenodytes forsteri
Afo_R010549
I
ENSAMXG00000015793
Astyanax mexicanus
ENSAMXG00000015793
I
ENSBTAP00000009187-D1
Bos grunniens
ENSBTAP00000009187-D1
I
MYRF
Bos taurus
ENSBTAG00000006990
I
Brh_R007745
Buceros rhinoceros
Brh_R007745
I
MYRF
Callithrix jacchus
ENSCJAG00000019218
I
Aan_R010750
Calypte anna
Aan_R010750
I
MYRF
Canis familiaris
ENSCAFG00000016062
I
MYRF
Cavia porcellus
ENSCPOG00000013543
I
ENSCSAG00000006452
Chlorocebus sabaeus
ENSCSAG00000006452
I
myrf
Danio rerio
ENSDARG00000078676
D
MYRF
Dasypus novemcinctus
ENSDNOG00000005294
I
Myrf
Dipodomys ordii
ENSDORG00000002029
I
MYRF
Equus caballus
ENSECAG00000021799
I
MYRF
Felis catus
ENSFCAG00000013683
I
ENSFALG00000011806
Ficedula albicollis
ENSFALG00000011806
I
ENSGMOG00000017696
Gadus morhua
ENSGMOG00000017696
I
ENSGALG00000020522
Gallus gallus
ENSGALG00000020522
I
myrf
Gasterosteus aculeatus
ENSGACG00000005416
I
Gfo_R011942
Geospiza fortis
Gfo_R011942
I
MYRF
Gorilla gorilla
ENSGGOG00000012529
I
MYRF
Homo sapiens
ENSG00000124920
D
ENSSTOG00000000529
Ictidomys tridecemlineatus
ENSSTOG00000000529
I
ENSLACG00000016455
Latimeria chalumnae
ENSLACG00000016455
I
ENSP00000278836
Macaca fascicularis
ENSP00000278836
I
MYRF
Macaca mulatta
ENSMMUG00000006655
I
ENSMMUG00000006501
Macaca mulatta
ENSMMUG00000006501
I
ENSMEUG00000004200
Macropus eugenii
ENSMEUG00000004200
I
MYRF
Meleagris gallopavo
ENSMGAG00000004733
I
ENSMPUG00000014126
Mustela putorius furo
ENSMPUG00000014126
I
Myrf
Mus musculus
ENSMUSG00000036098
D
MYRF
Myotis lucifugus
ENSMLUG00000010326
I
ENSNLEG00000003069
Nomascus leucogenys
ENSNLEG00000003069
I
Ogr07579
Ophisaurus gracilis
Ogr07579
N
ENSONIG00000015523
Oreochromis niloticus
ENSONIG00000015523
I
MYRF
Oryctolagus cuniculus
ENSOCUG00000003269
I
MYRF
Oryzias latipes
ENSORLG00000006459
I
MYRF
Otolemur garnettii
ENSOGAG00000010786
I
ENSOARG00000013482
Ovis aries
ENSOARG00000013482
I
ENSOARG00000020232
Ovis aries
ENSOARG00000020232
I
MYRF
Pan troglodytes
ENSPTRG00000003749
I
ENSPANG00000013413
Papio anubis
ENSPANG00000013413
I
ENSPSIG00000015590
Pelodiscus sinensis
ENSPSIG00000015590
I
ENSPFOG00000011050
Poecilia formosa
ENSPFOG00000011050
I
Pvit_15884
Pogona vitticeps
Pvit_15884
I
ENSPPYG00000003180
Pongo abelii
ENSPPYG00000003180
I
MYRF
Procavia capensis
ENSPCAG00000017079
I
MYRF
Pteropus vampyrus
ENSPVAG00000012342
I
Myrf
Rattus norvegicus
ENSRNOG00000028274
I
ENSSHAG00000002443
Sarcophilus harrisii
ENSSHAG00000002443
I
MYRF
Sus scrofa
ENSSSCG00000013078
I
ENSTGUG00000006600
Taeniopygia guttata
ENSTGUG00000006600
I
MYRF
Takifugu rubripes
ENSTRUG00000005197
I
MYRF
Tetraodon nigroviridis
ENSTNIG00000016074
I
Tal_R006175
Tyto alba
Tal_R006175
I
myrf.L
Xenopus laevis
XB-GENE-1020972
I
myrf
Xenopus tropicalis
XB-GENE-1020968
I
ENSXMAG00000003748
Xiphophorus maculatus
ENSXMAG00000003748
I