L804_03653 (Cryptococcus gattii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 L804_03653 T121186_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CNG02160
M01861_2.00 		Cryptococcus neoformans
NKTGCRCRNNN
NNNYGYGCAMN		 PBM
Weirauch et al.(2014)
pTH8370 		0.825 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIR99032 C2H2 ZF 24 48
KIR99032 C2H2 ZF 54 78
KIR99032 C2H2 ZF 84 106
KIR99032 C2H2 ZF 112 137

Links

Other C2H2 ZF family TFs
Other Cryptococcus gattii TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00025p00072580 Amborella trichopoda AMTR_s00025p00072580 I
Aquca_043_00021 Aquilegia coerulea Aquca_043_00021 I
scaffold_401930.1 Arabidopsis lyrata scaffold_401930.1 I
ASR3 Arabidopsis thaliana AT2G33550 D
Bostr.23794s0746 Boechera stricta Bostr.23794s0746 I
Bo4g182020 Brassica oleracea Bo4g182020 I
Bo4g043600 Brassica oleracea Bo4g043600 I
Bra021860 Brassica rapa Bra021860 I
Bra005486 Brassica rapa Bra005486 I
PK25885.1 Cannabis sativa PK25885.1 I
Carubv10023675m.g Capsella rubella Carubv10023675m.g I
evm.TU.supercontig_2461.1 Carica papaya evm.TU.supercontig_2461.1 I
Ciclev10005329m.g Citrus clementina Ciclev10005329m.g I
Ciclev10033491m.g Citrus clementina Ciclev10033491m.g I
orange1.1g019057m.g Citrus sinensis orange1.1g019057m.g I
orange1.1g038571m.g Citrus sinensis orange1.1g038571m.g I
Cucsa.349220 Cucumis sativus Cucsa.349220 I
Eucgr.B03553 Eucalyptus grandis Eucgr.B03553 I
Thhalv10016974m.g Eutrema salsugineum Thhalv10016974m.g I
GLYMA18G51790 Glycine max GLYMA18G51790 I
GLYMA08G28880 Glycine max GLYMA08G28880 I
Gorai.002G021600 Gossypium raimondii Gorai.002G021600 I
chr1.LjT14I13.140.nd Lotus japonicus chr1.LjT14I13.140.nd I
MDP0000232058 Malus domestica MDP0000232058 I
cassava40545.m1 Manihot esculenta cassava40545.m1 I
cassava13649.valid.m1 Manihot esculenta cassava13649.valid.m1 I
cassava12909.valid.m1 Manihot esculenta cassava12909.valid.m1 I
mgf009760m Mimulus guttatus mgf009760m I
POPTR_0003s16150 Populus trichocarpa POPTR_0003s16150 I
POPTR_0001s13060 Populus trichocarpa POPTR_0001s13060 I
Pm024597 Prunus mume Pm024597 I
30128.m008552 Ricinus communis 30128.m008552 I
SapurV1A.0499s0110 Salix purpurea SapurV1A.0499s0110 I
SapurV1A.2674s0010 Salix purpurea SapurV1A.2674s0010 I
Si017674m.g Setaria italica Si017674m.g I
Solyc04g045430.2 Solanum lycopersicum Solyc04g045430.2 I
VIT_17s0000g00270 Vitis vinifera VIT_17s0000g00270 I
VIT_01s0150g00050 Vitis vinifera VIT_01s0150g00050 I