ORUFI01G40000 (Oryza rufipogon)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ORUFI01G40000 T125133_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.788 0.783
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.788 0.783
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.787 0.717
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.778 0.739
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.778 0.739
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.771 0.674
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.768 0.761
AT3G46070
M06813_2.00 		Arabidopsis thaliana
HYHHYHTCACTYHHH
DDDRAGTGADRDDRD		 Dap-seq
OMalley et al.(2016)
AT3G46070_col_a 		0.760 0.804
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI01G40000.1 C2H2 ZF 59 81
ORUFI01G40000.1 C2H2 ZF 122 144

Links

Other C2H2 ZF family TFs
Other Oryza rufipogon TFs

377 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGOS_AAL175W Ashbya gossypii AGOS_AAL175W I
CaO19.10262 Candida albicans CaO19.10262 I
CaO19.2748 Candida albicans CaO19.2748 I
CD36_42420 Candida dubliniensis CD36_42420 I
CAGL0H06875g Candida glabrata CAGL0H06875g I
PGUG_03209 Candida guilliermondii PGUG_03209 I
G210_1017 Candida maltosa G210_1017 I
CORT_0E00270 Candida orthopsilosis CORT_0E00270 I
CPAG_00315 Candida parapsilosis CPAG_00315 I
CTRG_00138 Candida tropicalis CTRG_00138 I
DEHA2E16302g Debaryomyces hansenii DEHA2E16302g I
Ecym_8159 Eremothecium cymbalariae Ecym_8159 I
HMPREF1120_05596 Exophiala dermatitidis HMPREF1120_05596 I
PV10_01357 Exophiala mesophila PV10_01357 I
KAFR_0L02130 Kazachstania africana KAFR_0L02130 I
KNAG_0J00210 Kazachstania naganishii KNAG_0J00210 I
KLLA0_D10197g Kluyveromyces lactis KLLA0_D10197g I
KLTH0E16500g Kluyveromyces thermotolerans KLTH0E16500g I
Kwal_9688 Kluyveromyces waltii Kwal_9688 I
PAS_chr2-1_0029 Komagataella pastoris PAS_chr2-1_0029 I
KUCA_T00006060001 Kuraishia capsulata KUCA_T00006060001 I
SAKL0D00264g Lachancea kluyveri SAKL0D00264g I
LALA0_S01e00826g Lachancea lanzarotensis LALA0_S01e00826g I
KLTH0E16500g Lachancea thermotolerans KLTH0E16500g I
LELG_04177 Lodderomyces elongisporus LELG_04177 I
PGUG_03209 Meyerozyma guilliermondii PGUG_03209 I
GNLVRS01_PISO0M20692g Millerozyma farinosa GNLVRS01_PISO0M20692g I
GNLVRS01_PISO0N20935g Millerozyma farinosa GNLVRS01_PISO0N20935g I
NCAS_0C00220 Naumovozyma castellii NCAS_0C00220 I
NDAI_0K00150 Naumovozyma dairenensis NDAI_0K00150 I
F503_08421 Ophiostoma piceae uamh F503_08421 I
XP_002490909.1 Pichia pastoris XP_002490909.1 I
e_gww1.1.1.1491.1 Pichia stipitis e_gww1.1.1.1491.1 I
SU7_2431 Saccharomyces arboricola SU7_2431 I
18194_YML099C Saccharomyces bayanus 18194_YML099C I
Scas_Contig626.6 Saccharomyces castellii Scas_Contig626.6 I
ARG81 Saccharomyces cerevisiae YML099C D
SKUD_195006 Saccharomyces kudriavzevii SKUD_195006 I
16040_YML099C Saccharomyces mikatae 16040_YML099C I
AACERI_AaceriAAL175W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL175W I
PICST_51603 Scheffersomyces stipitis PICST_51603 I
SPAPADRAFT_69629 Spathaspora passalidarum SPAPADRAFT_69629 I
TDEL_0B00480 Torulaspora delbrueckii TDEL_0B00480 I
TRIATDRAFT_141953 Trichoderma atroviride TRIATDRAFT_141953 I
Kpol_538p52 Vanderwaltozyma polyspora Kpol_538p52 I
Kpol_455p10 Vanderwaltozyma polyspora Kpol_455p10 I
PV09_07428 Verruconis gallopava PV09_07428 I
YALI0_D09647g Yarrowia lipolytica YALI0_D09647g I
ZBAI_08687 Zygosaccharomyces bailii ZBAI_08687 I
ZBAI_03002 Zygosaccharomyces bailii ZBAI_03002 I
ZYRO0A00440g Zygosaccharomyces rouxii ZYRO0A00440g I