PAS_chr1-3_0170 (Komagataella pastoris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PAS_chr1-3_0170 T125379_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MET32
M00022_2.00 		Saccharomyces cerevisiae
NVMGCCACAV
BTGTGGCKBN		 PBM
Badis et al.(2008)
MET32_2153 		0.758 0.750
MET32
M01528_2.00 		Saccharomyces cerevisiae
MGCCACAN
NTGTGGCK		 PBM
Zhu et al.(2009)
Met32 		0.758 0.750
MET32
M07452_2.00 		Saccharomyces cerevisiae
MGCCACM
KGTGGCK		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0334.1 		0.758 0.750
MET32
M08518_2.00 		Saccharomyces cerevisiae
VHKCCACA
TGTGGMDB		 Misc
DeBoer et al.(2011)
YDR253C_1375 		0.758 0.750
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAY67232 C2H2 ZF 217 239
CAY67232 C2H2 ZF 246 266

Links

Other C2H2 ZF family TFs
Other Komagataella pastoris TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CLUG_01736 Candida lusitaniae CLUG_01736 I
CLUG_01736 Clavispora lusitaniae CLUG_01736 I
L804_06405 Cryptococcus gattii L804_06405 N
CNH00970 Cryptococcus neoformans CNH00970 N
DACRYDRAFT_55334 Dacryopinax sp DACRYDRAFT_55334 I
MELLADRAFT_36585 Melampsora laricipopulina MELLADRAFT_36585 N
gww2.13.348.1 Phanerochaete chrysosporium gww2.13.348.1 I
PHLGIDRAFT_44970 Phlebiopsis gigantea PHLGIDRAFT_44970 I
gw1.13.295.1 Phycomyces blakesleeanus gw1.13.295.1 I
POSPLDRAFT_43009 Postia placenta POSPLDRAFT_43009 I
RO3G_01462 Rhizopus oryzae RO3G_01462 I
RO3G_02095 Rhizopus oryzae RO3G_02095 I
M408DRAFT_49948 Serendipita vermifera M408DRAFT_49948 I
K437DRAFT_217718 Tilletiaria anomala K437DRAFT_217718 N
M407DRAFT_17900 Tulasnella calospora M407DRAFT_17900 I
M407DRAFT_84761 Tulasnella calospora M407DRAFT_84761 I