PICST_33273 (Scheffersomyces stipitis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PICST_33273 T126336_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CaO19.4752
M01035_2.00 		Candida albicans
VCCCCYDNNN
NNNHRGGGGB		 PBM
Siggers et al.(2014)
Msn4_orf19.4752Calb 		0.774 0.913
KLLA0_F26961g
M01039_2.00 		Kluyveromyces lactis
CYCCYTD
HARGGRG		 PBM
Siggers et al.(2014)
KLLA0F29691gKlac 		0.761 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ABN68021 C2H2 ZF 768 791
ABN68021 C2H2 ZF 797 819

Links

Other C2H2 ZF family TFs
Other Scheffersomyces stipitis TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CaO19.12215 Candida albicans CaO19.12215 I 0.774
CaO19.4752 Candida albicans CaO19.4752 D 0.774
CD36_08440 Candida dubliniensis CD36_08440 I 0.798
PGUG_01635 Candida guilliermondii PGUG_01635 I 0.792
CLUG_01356 Candida lusitaniae CLUG_01356 I 0.798
G210_5389 Candida maltosa G210_5389 I 0.774
CORT_0A05380 Candida orthopsilosis CORT_0A05380 I 0.762
CPAG_03960 Candida parapsilosis CPAG_03960 N 0.786
CANTEDRAFT_134781 Candida tenuis CANTEDRAFT_134781 I 0.798
CTRG_03253 Candida tropicalis CTRG_03253 I 0.774
CLUG_01356 Clavispora lusitaniae CLUG_01356 I 0.798
DEHA2A08382g Debaryomyces hansenii DEHA2A08382g I 0.792
KLLA0_F26961g Kluyveromyces lactis KLLA0_F26961g D 0.761
KLTH0D08734g Kluyveromyces thermotolerans KLTH0D08734g I 0.773
Kwal_8351 Kluyveromyces waltii Kwal_8351 I 0.773
PAS_chr2-1_0723 Komagataella pastoris PAS_chr2-1_0723 I 0.755
SAKL0B11330g Lachancea kluyveri SAKL0B11330g I 0.773
LALA0_S09e05358g Lachancea lanzarotensis LALA0_S09e05358g I 0.773
KLTH0D08734g Lachancea thermotolerans KLTH0D08734g I 0.773
PGUG_01635 Meyerozyma guilliermondii PGUG_01635 I 0.792
GNLVRS01_PISO0F07089g Millerozyma farinosa GNLVRS01_PISO0F07089g I 0.798
GNLVRS01_PISO0E05768g Millerozyma farinosa GNLVRS01_PISO0E05768g I 0.803
NCAS_0A12910 Naumovozyma castellii NCAS_0A12910 I 0.757
XP_002491652.1 Pichia pastoris XP_002491652.1 I 0.755
fgenesh1_pg.C_chr_7.1000062 Pichia stipitis fgenesh1_pg.C_chr_7.1000062 I 0.827
Scas_Contig709.32 Saccharomyces castellii Scas_Contig709.32 I 0.757
TPHA_0C02580 Tetrapisispora phaffii TPHA_0C02580 I 0.761
BN7_2125 Wickerhamomyces ciferrii BN7_2125 I 0.758