CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
POPTR_0022s00900
(
Populus trichocarpa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
POPTR_0022s00900
T126852_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0022s00900.1
C2H2 ZF
81
105
FLCSFEGCGKTFIDAGALRKHSHIH
POPTR_0022s00900.1
C2H2 ZF
110
134
YVCHYEGCGKKFLDSSKLKRHFLIH
POPTR_0022s00900.1
C2H2 ZF
140
164
FVCPHEGCGKAFSLDFNLRSHMKTH
POPTR_0022s00900.1
C2H2 ZF
170
195
HICPYSECGKRYAHEYKLKNHIASHH
POPTR_0022s00900.1
C2H2 ZF
233
258
YICPYEGCEKDYIHEYKLKLHLRREH
Links
Other
C2H2 ZF
family TFs
Other
Populus trichocarpa
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GD22157
Drosophila simulans
FBgn0193567
N