CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PPA09748
(
Pristionchus pacificus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PPA09748
T127020_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA09748
C2H2 ZF
65
88
LKCPKCNWHYKYQETLEIHMKEKH
PPA09748
C2H2 ZF
120
144
YRCEVCKYSTTTKGNLSIHMQSDKH
Links
Other
C2H2 ZF
family TFs
Other
Pristionchus pacificus
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG016667.1
Alligator sinensis
Alligator_sinensis_CCG016667.1
N
0.000
ENSAPLG00000014876
Anas platyrhynchos
ENSAPLG00000014876
N
0.000
TRERF1
Anolis carolinensis
ENSACAG00000001080
N
0.000
ENSBTAP00000020376-D1
Bos grunniens
ENSBTAP00000020376-D1
N
0.000
TRERF1
Bos taurus
ENSBTAG00000015321
N
0.000
TRERF1
Callithrix jacchus
ENSCJAG00000004347
N
0.000
Aan_R011464
Calypte anna
Aan_R011464
N
0.000
TRERF1
Canis familiaris
ENSCAFG00000001642
N
0.000
TRERF1
Cavia porcellus
ENSCPOG00000015717
N
0.000
Cmyd_10010458
Chelonia mydas
Cmyd_10010458
N
0.000
TRERF1
Choloepus hoffmanni
ENSCHOG00000006120
N
0.000
TRERF1
Equus caballus
ENSECAG00000016971
N
0.000
TRERF1
Felis catus
ENSFCAG00000011210
N
0.000
TRERF1
Gallus gallus
ENSGALG00000009896
N
0.000
TRERF1
Gorilla gorilla
ENSGGOG00000012813
N
0.000
TRERF1
Homo sapiens
ENSG00000124496
N
0.000
ENSSTOG00000022996
Ictidomys tridecemlineatus
ENSSTOG00000022996
N
0.000
ENSLACG00000008926
Latimeria chalumnae
ENSLACG00000008926
N
0.000
ENSLOCG00000017240
Lepisosteus oculatus
ENSLOCG00000017240
N
0.000
TRERF1
Loxodonta africana
ENSLAFG00000007825
N
0.000
ENSP00000362013
Macaca fascicularis
ENSP00000362013
N
0.000
TRERF1
Meleagris gallopavo
ENSMGAG00000013894
N
0.000
TRERF1
Monodelphis domestica
ENSMODG00000019042
N
0.000
ENSMPUG00000013360
Mustela putorius furo
ENSMPUG00000013360
N
0.000
Myotis_brandtii_Trerf1_10015386
Myotis brandtii
Myotis_brandtii_Trerf1_10015386
N
0.000
TRERF1
Myotis lucifugus
ENSMLUG00000016748
N
0.000
ENSNLEG00000004772
Nomascus leucogenys
ENSNLEG00000004772
N
0.000
Ogr07462
Ophisaurus gracilis
Ogr07462
N
0.000
TRERF1
Ornithorhynchus anatinus
ENSOANG00000008467
N
0.000
TRERF1
Otolemur garnettii
ENSOGAG00000025610
N
0.000
ENSOARG00000003358
Ovis aries
ENSOARG00000003358
N
0.000
ENSPANG00000009451
Papio anubis
ENSPANG00000009451
N
0.000
ENSPSIG00000009755
Pelodiscus sinensis
ENSPSIG00000009755
N
0.000
Pvit_13408
Pogona vitticeps
Pvit_13408
N
0.000
ENSPPYG00000016614
Pongo abelii
ENSPPYG00000016614
N
0.000
TRERF1
Pteropus vampyrus
ENSPVAG00000007626
N
0.000
Trerf1
Rattus norvegicus
ENSRNOG00000022598
N
0.000
ENSSHAG00000004599
Sarcophilus harrisii
ENSSHAG00000004599
N
0.000
TRERF1
Sus scrofa
ENSSSCG00000001639
N
0.000
TRERF1
Taeniopygia guttata
ENSTGUG00000003250
N
0.000
ENSTSYG00000003874
Tarsius syrichta
ENSTSYG00000003874
N
0.000
ENSTBEG00000012133
Tupaia belangeri
ENSTBEG00000012133
N
0.000
TRERF1
Tursiops truncatus
ENSTTRG00000014065
N
0.000
trerf1
Xenopus tropicalis
XB-GENE-940630
N
0.000