CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si019142m.g
(
Setaria italica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Si019142m.g
T128673_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si019142m
C2H2 ZF
13
36
KCAACYRQYNRMEHLVEHMKVNYH
Si019142m
C2H2 ZF
42
62
RCGVCGKHCRSFESLREHLIG
Links
Other
C2H2 ZF
family TFs
Other
Setaria italica
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra033033
Brassica rapa
Bra033033
N
0.778
evm.TU.supercontig_39.83
Carica papaya
evm.TU.supercontig_39.83
N
0.763
Gorai.007G340600
Gossypium raimondii
Gorai.007G340600
N
0.770
cassava27353.m1
Manihot esculenta
cassava27353.m1
N
0.763
Pavir.Aa00794
Panicum virgatum
Pavir.Aa00794
N
0.827
Pavir.Ab02840
Panicum virgatum
Pavir.Ab02840
N
0.827
GRMZM2G127846
Zea mays
GRMZM2G127846
N
0.797