Solyc03g115450.1 (Solanum lycopersicum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Solyc03g115450.1 T129356_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.822 0.848
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.797 0.804
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.797 0.783
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.776 0.717
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc03g115450.1.1 C2H2 ZF 290 312
Solyc03g115450.1.1 C2H2 ZF 354 376

Links

Other C2H2 ZF family TFs
Other Solanum lycopersicum TFs

303 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF25 Callithrix jacchus ENSCJAG00000000783 I
ZNF25 Choloepus hoffmanni ENSCHOG00000012000 I
ZNF25 Dasypus novemcinctus ENSDNOG00000038275 N
Zfp9 Dipodomys ordii ENSDORG00000004502 I
ZNF25 Homo sapiens ENSG00000175395 D
ENSMMUP00000014495 Macaca fascicularis ENSMMUP00000014495 I
ENSMMUP00000035983 Macaca fascicularis ENSMMUP00000035983 N
ENSMMUG00000001461 Macaca mulatta ENSMMUG00000001461 I
ENSMMUG00000005404 Macaca mulatta ENSMMUG00000005404 I
ZNF25 Microcebus murinus ENSMICG00000004606 I
ENSNLEG00000008708 Nomascus leucogenys ENSNLEG00000008708 I
ZNF25 Otolemur garnettii ENSOGAG00000032242 I
ZNF25 Pan troglodytes ENSPTRG00000042406 I
ENSPANG00000018807 Papio anubis ENSPANG00000018807 I
ENSPPYG00000002203 Pongo abelii ENSPPYG00000002203 I