VDAG_01569 (Verticillium dahliae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 VDAG_01569 T131319_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HCBG_04116
M01448_2.00 		Histoplasma capsulatum
RHCHGWGCDB
VHGCWCDGDY		 PBM
Najafabadi et al.(2015a)
pTH11149 		0.804 0.913
NCU03975
M01879_2.00 		Neurospora crassa
NNRCWYDDNN
NNHHRWGYNN		 PBM
Weirauch et al.(2014)
pTH9677 		0.798 0.935
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EGY17887 C2H2 ZF 133 155
EGY17887 C2H2 ZF 161 185
EGY17887 C2H2 ZF 191 213
EGY17887 C2H2 ZF 219 243

Links

Other C2H2 ZF family TFs
Other Verticillium dahliae TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRFL8 Arabidopsis thaliana AT2G37025 N
Bostr.23794s0389 Boechera stricta Bostr.23794s0389 N
Bo3g031460 Brassica oleracea Bo3g031460 N
Bra023092 Brassica rapa Bra023092 N
Cagra.0666s0044 Capsella grandiflora Cagra.0666s0044 N
Carubv10024894m.g Capsella rubella Carubv10024894m.g N
evm.TU.supercontig_92.112 Carica papaya evm.TU.supercontig_92.112 N
Ciclev10011603m.g Citrus clementina Ciclev10011603m.g N
orange1.1g011420m.g Citrus sinensis orange1.1g011420m.g N
Thhalv10016738m.g Eutrema salsugineum Thhalv10016738m.g N