CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Afo_R003159
(
Aptenodytes forsteri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Afo_R003159
T132765_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Afo_R003159
C2H2 ZF
3
27
YVCDYEGCGKGFTRDFHRARHLLTH
Afo_R003159
C2H2 ZF
33
58
FECTADGCNQKFVTKSNLKKHIERKH
Afo_R003159
C2H2 ZF
65
89
YVCDFEGCNKSFRKHQQLKVHQCHH
Afo_R003159
C2H2 ZF
95
119
FKCNNEGCGKYFSTPSRLKRHEKIH
Afo_R003159
C2H2 ZF
122
147
YACKKENCSYTGKTWTELLKHNKESH
Afo_R003159
C2H2 ZF
151
173
IVCNECYKTFKRKDYLKQHQKTH
Afo_R003159
C2H2 ZF
180
205
CRCPREGCGRTYTTVFNLQSHILSFH
Afo_R003159
C2H2 ZF
211
235
FSCDYPGCGRVFAMKQSLSRHTVVH
Links
Other
C2H2 ZF
family TFs
Other
Aptenodytes forsteri
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_22696
Cicer arietinum
Ca_22696
N
orange1.1g023366m.g
Citrus sinensis
orange1.1g023366m.g
N
Cucsa.320500
Cucumis sativus
Cucsa.320500
N
Gorai.007G225400
Gossypium raimondii
Gorai.007G225400
N
PGSC0003DMG400000998
Solanum tuberosum
PGSC0003DMG400000998
N