CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.320500
(
Cucumis sativus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Cucsa.320500
T137938_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.320500.1
C2H2 ZF
119
142
YLCRVCGRNFYTNEKLVNHFKQIH
Links
Other
C2H2 ZF
family TFs
Other
Cucumis sativus
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_22696
Cicer arietinum
Ca_22696
N
0.827
Eucgr.E00472
Eucalyptus grandis
Eucgr.E00472
N
0.788
cassava21183.m1
Manihot esculenta
cassava21183.m1
N
0.784
VIT_02s0241g00170
Vitis vinifera
VIT_02s0241g00170
N
0.784
PGSC0003DMG400000998
Solanum tuberosum
PGSC0003DMG400000998
N
0.779
Gorai.007G225400
Gossypium raimondii
Gorai.007G225400
N
0.769
orange1.1g023366m.g
Citrus sinensis
orange1.1g023366m.g
N
0.766
Ciclev10020688m.g
Citrus clementina
Ciclev10020688m.g
N
0.766