Afo_R003947 (Aptenodytes forsteri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Afo_R003947 T132780_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYNN
M08283_2.00 		Homo sapiens
GRCTYTTAWTTT
AAAWTAARAGYC		 ChIP-seq
Schmitges et al.(2016)
Q9NPC7_1-4.RCADE 		0.817 0.973
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R003947 C2H2 ZF 305 326
Afo_R003947 C2H2 ZF 332 354
Afo_R003947 C2H2 ZF 360 383
Afo_R003947 C2H2 ZF 389 411
Afo_R003947 C2H2 ZF 417 439
Afo_R003947 C2H2 ZF 445 467
Afo_R003947 C2H2 ZF 473 495
Afo_R003947 C2H2 ZF 501 524

Links

Other C2H2 ZF family TFs
Other Aptenodytes forsteri TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART11G02410 Oryza barthii OBART11G02410 N 0.000
OBART11G02420 Oryza barthii OBART11G02420 N 0.000
OB0044G10270 Oryza brachyantha OB0044G10270 N 0.000
ORGLA12G0020400 Oryza glaberrima ORGLA12G0020400 N 0.000
OGLUM11G02110 Oryza glumaepatula OGLUM11G02110 N 0.000
OGLUM12G02750 Oryza glumaepatula OGLUM12G02750 N 0.000
BGIOSGA034760 Oryza indica BGIOSGA034760 N 0.000
BGIOSGA036958 Oryza indica BGIOSGA036958 N 0.000
ONIVA11G02640 Oryza nivara ONIVA11G02640 N 0.000
OPUNC12G02190 Oryza punctata OPUNC12G02190 N 0.000
ORUFI11G02370 Oryza rufipogon ORUFI11G02370 N 0.000
ORUFI12G02540 Oryza rufipogon ORUFI12G02540 N 0.000
OS11G0139600 Oryza sativa OS11G0139600 N 0.000
Traes_4DS_050789E2A Triticum aestivum Traes_4DS_050789E2A N 0.000
Traes_5DL_E275797CE Triticum aestivum Traes_5DL_E275797CE N 0.000