CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA12G0020400
(
Oryza glaberrima
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
ORGLA12G0020400
T200984_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA12G0020400.1
GRAS
167
547
LRELLMSCAQAVASGNRRSAGELLEQIKRHSSPTGDATERLAHYFADGLEARLAGAASLEHRLLASAEERASAMELLEAYQVFMAACCFKWVAFTFANMAILRAAEGRSKVHIVDYGGQYHGLQWPSLLQRLAEREGGPPEVRMTLVGHPQPGFRPARRLERTGRRLSNCARAFGLPFKFRAVAAARWETVTSEDVVGVDPDEAAVVVNDVLSLGTLMDESGVFDDPSPRDTVLGSIRDMRPAVFVQAVVNGAHGAPFFPTRFREALFFFSALFDMLDATTPEEGSHLRVVLERDVLRRAAVGVIAGEGAERVERPETYRRWQARNRRAGLRQVAVEADVVEAVRRRVRRRHHEEFVIEEDAGWLLQGWKGRILYAHSAWV
Links
Other
GRAS
family TFs
Other
Oryza glaberrima
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA036958
Oryza indica
BGIOSGA036958
N
0.992
OGLUM12G02750
Oryza glumaepatula
OGLUM12G02750
N
0.992
ONIVA11G02640
Oryza nivara
ONIVA11G02640
N
0.989
OMERI12G01090
Oryza meridionalis
OMERI12G01090
N
0.976
BGIOSGA034760
Oryza indica
BGIOSGA034760
N
0.973
OGLUM11G02110
Oryza glumaepatula
OGLUM11G02110
N
0.970
OPUNC12G02190
Oryza punctata
OPUNC12G02190
N
0.949
OS11G0139600
Oryza sativa
OS11G0139600
N
0.949
ORUFI11G02370
Oryza rufipogon
ORUFI11G02370
N
0.925
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.750
OB0044G10270
Oryza brachyantha
OB0044G10270
N
0.710