CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI12G01090
(
Oryza meridionalis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OMERI12G01090
T200819_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI12G01090.1
GRAS
165
547
LRELLMSCAQAVASGNRRSAGELLEQIKRHSSPTGDATERLAHYFADGLEARLAGASSLERRLLASAEERASAMELLEAYQVFMAACCFKWVAFTFANMAILRAAEGRSKLHIVDYGGQYHGLQWPSLLQRLAEREGGPPEVRMTLVGHPQPGFRPARRLERTGRRLSNCARAFGLPFKFRAVAAARWETVTAEDVVGVDPDPDEEAVVVNDVLSLGTLMDESGVFDDPSPRDTVLGSIRDMRPAVFVQAVVNSAHGAPFFPTRFREALFFFSALFDMLDATTPEEGSRLRTVLERDVLRRAAVGVIAGEGAERVERPETYRRWQARNRRAGLRQVAVEGDVVEAVRRRVRRRHHEEFVIEEDAGWLLQGWKGRILYAHSAWV
Links
Other
GRAS
family TFs
Other
Oryza meridionalis
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA11G02640
Oryza nivara
ONIVA11G02640
N
0.984
BGIOSGA034760
Oryza indica
BGIOSGA034760
N
0.978
BGIOSGA036958
Oryza indica
BGIOSGA036958
N
0.976
OGLUM12G02750
Oryza glumaepatula
OGLUM12G02750
N
0.976
ORGLA12G0020400
Oryza glaberrima
ORGLA12G0020400
N
0.976
OGLUM11G02110
Oryza glumaepatula
OGLUM11G02110
N
0.973
OS11G0139600
Oryza sativa
OS11G0139600
N
0.955
OBART11G02420
Oryza barthii
OBART11G02420
N
0.952
OBART11G02410
Oryza barthii
OBART11G02410
N
0.947
OPUNC12G02190
Oryza punctata
OPUNC12G02190
N
0.941
ORUFI11G02370
Oryza rufipogon
ORUFI11G02370
N
0.920
ORUFI12G02540
Oryza rufipogon
ORUFI12G02540
N
0.870
OB0044G10270
Oryza brachyantha
OB0044G10270
N
0.846
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.750
Traes_5DL_E275797CE
Triticum aestivum
Traes_5DL_E275797CE
N
0.711