CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Afo_R014239
(
Aptenodytes forsteri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Afo_R014239
T132924_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Afo_R014239
C2H2 ZF
11
33
YMCADCGKSFSRRSHLIQHQRVH
Afo_R014239
C2H2 ZF
39
61
YQCKDCGKSFSQSTHLVQHQRNH
Afo_R014239
C2H2 ZF
67
89
YVCAKCGRNFYQNSGLLRHANFH
Afo_R014239
C2H2 ZF
95
117
YKCPQCGKRFSDSSNLIAHQRLH
Afo_R014239
C2H2 ZF
123
145
YKCADCNKCFSESSKLVIHRRVH
Afo_R014239
C2H2 ZF
151
173
YLCPDCGKSFSQRSHLVQHRRTH
Afo_R014239
C2H2 ZF
179
201
YKCAECGTCFSDNSTLIRHRRTH
Afo_R014239
C2H2 ZF
207
229
FKCSHCGKSFSRNSYLVSHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Aptenodytes forsteri
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EVEC_0000058501
Enterobius vermicularis
EVEC_0000058501
N
GLI3
Erinaceus europaeus
ENSEEUG00000011742
N
ENSGMOG00000006713
Gadus morhua
ENSGMOG00000006713
N
GPUH_0002534801
Gongylonema pulchrum
GPUH_0002534801
N
GLI2
Loxodonta africana
ENSLAFG00000009839
N
ENSMLUG00000024804
Myotis lucifugus
ENSMLUG00000024804
N
OESDEN_10393
Oesophagostomum dentatum
OESDEN_10393
N
ENSOANG00000009722
Ornithorhynchus anatinus
ENSOANG00000009722
N
SINV10052
Solenopsis invicta
SINV10052
N
SMAR000916
Strigamia maritima
SMAR000916
N
D917_03713
Trichinella nativa
D917_03713
N
EFV50991
Trichinella spiralis
EFV50991
N
ENSXMAG00000012821
Xiphophorus maculatus
ENSXMAG00000012821
N