CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
D917_03713
(
Trichinella nativa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
D917_03713
T152857_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D917_03713
C2H2 ZF
342
361
LHCNKAYSRLENLKTHLRSH
D917_03713
C2H2 ZF
367
392
YSCEFPGCQKRFTNASDRAKHQNRTH
D917_03713
C2H2 ZF
398
423
YSCPVPNCDKRYTDPSSLRKHMKTTH
Links
Other
C2H2 ZF
family TFs
Other
Trichinella nativa
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EFV50991
Trichinella spiralis
EFV50991
N
0.808
D918_09957
Trichuris suis
D918_09957
N
0.781
GLI3
Erinaceus europaeus
ENSEEUG00000011742
N
0.780
ENSGMOG00000006713
Gadus morhua
ENSGMOG00000006713
N
0.780
ENSMLUG00000024804
Myotis lucifugus
ENSMLUG00000024804
N
0.780
ENSOANG00000009722
Ornithorhynchus anatinus
ENSOANG00000009722
N
0.780
ENSXMAG00000012821
Xiphophorus maculatus
ENSXMAG00000012821
N
0.780
SINV10052
Solenopsis invicta
SINV10052
N
0.780
SMAR000916
Strigamia maritima
SMAR000916
N
0.780
GLI2
Loxodonta africana
ENSLAFG00000009839
N
0.776
EVEC_0000148501
Enterobius vermicularis
EVEC_0000148501
N
0.770
GLI1
Erinaceus europaeus
ENSEEUG00000010481
N
0.761
GLI2
Echinops telfairi
ENSETEG00000020154
N
0.761
ECANG7_07369
Echinococcus canadensis
ECANG7_07369
N
0.761
HNAJ_0000031101
Hymenolepis nana
HNAJ_0000031101
N
0.761
EVEC_0000058501
Enterobius vermicularis
EVEC_0000058501
N
0.758