Alligator_sinensis_CCG018236.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG018236.1 T133395_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG018236.1 C2H2 ZF 59 81
Alligator_sinensis_CCG018236.1 C2H2 ZF 87 109
Alligator_sinensis_CCG018236.1 C2H2 ZF 115 137

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gw1.23.237.1 Phytophthora capsici gw1.23.237.1 N 0.000
PITG_12841 Phytophthora infestans PITG_12841 N 0.000
fgenesh_scip_prom.46568.4280 Phytophthora kernoviae fgenesh_scip_prom.46568.4280 N 0.000
fgenesh_scip_prom.28083.3870 Phytophthora lateralis fgenesh_scip_prom.28083.3870 N 0.000
F443_02366 Phytophthora parasitica F443_02366 N 0.000
F443_02365 Phytophthora parasitica F443_02365 N 0.000
Phyra75006 Phytophthora ramorum Phyra75006 N 0.000
Phyra93994 Phytophthora ramorum Phyra93994 N 0.000
Physo134088 Phytophthora sojae Physo134088 N 0.000
Physo143269 Phytophthora sojae Physo143269 N 0.000
Physo143270 Phytophthora sojae Physo143270 N 0.000
maker-pag1_scaffold_26-snap-gene-0.60 Pythium aphanidermatum maker-pag1_scaffold_26-snap-gene-0.60 N 0.000
maker-pag1_scaffold_571-snap-gene-0.7 Pythium aphanidermatum maker-pag1_scaffold_571-snap-gene-0.7 N 0.000
maker-par_contig_6341-snap-gene-0.1 Pythium arrhenomanes maker-par_contig_6341-snap-gene-0.1 N 0.000
maker-pir_contig_87-fgenesh-gene-0.17 Pythium irregulare maker-pir_contig_87-fgenesh-gene-0.17 N 0.000
fgenesh-pir_contig_1013-abinit-gene-0.11 Pythium irregulare fgenesh-pir_contig_1013-abinit-gene-0.11 N 0.000
maker-piw_contig_165-snap-gene-0.13 Pythium iwayamai maker-piw_contig_165-snap-gene-0.13 N 0.000
PYU1_G007782 Pythium ultimum PYU1_G007782 N 0.000
maker-pve_contig_476-snap-gene-0.24 Pythium vexans maker-pve_contig_476-snap-gene-0.24 N 0.000