Cmyd_10005145 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10005145 T134263_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB48
M08391_2.00 		Homo sapiens
HHDNTCCCTDR
YHAGGGANHDD		 ChIP-seq
Schmitges et al.(2016)
P10074.MEME 		0.811 0.952
ZBTB48
M08956_2.00 		Homo sapiens
BHBRVTCCCTDR
YHAGGGABYVDV		 Misc
Kulakovskiy et al.(2013)
ZBT48_HUMAN.H11MO.0.C 		0.811 0.952
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10005145 C2H2 ZF 115 137
Cmyd_10005145 C2H2 ZF 143 164
Cmyd_10005145 C2H2 ZF 174 196
Cmyd_10005145 C2H2 ZF 202 225
Cmyd_10005145 C2H2 ZF 260 283
Cmyd_10005145 C2H2 ZF 289 311
Cmyd_10005145 C2H2 ZF 317 339
Cmyd_10005145 C2H2 ZF 345 368
Cmyd_10005145 C2H2 ZF 374 396
Cmyd_10005145 C2H2 ZF 402 424

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PAN0_009c3722 Pseudozyma antarctica PAN0_009c3722 N
PFL1_02615 Pseudozyma flocculosa PFL1_02615 N
PHSY_001236 Pseudozyma hubeiensis PHSY_001236 N
sr11162 Sporisorium reilianum sr11162 N
UHOR_05544 Ustilago hordei UHOR_05544 N
UM03613 Ustilago maydis UM03613 N