Cmyd_10005145 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10005145 T134263_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB48
M08391_2.00 		Homo sapiens
HHDNTCCCTDR
YHAGGGANHDD		 ChIP-seq
Schmitges et al.(2016)
P10074.MEME 		0.811 0.952
ZBTB48
M08956_2.00 		Homo sapiens
BHBRVTCCCTDR
YHAGGGABYVDV		 Misc
Kulakovskiy et al.(2013)
ZBT48_HUMAN.H11MO.0.C 		0.811 0.952
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10005145 C2H2 ZF 115 137
Cmyd_10005145 C2H2 ZF 143 164
Cmyd_10005145 C2H2 ZF 174 196
Cmyd_10005145 C2H2 ZF 202 225
Cmyd_10005145 C2H2 ZF 260 283
Cmyd_10005145 C2H2 ZF 289 311
Cmyd_10005145 C2H2 ZF 317 339
Cmyd_10005145 C2H2 ZF 345 368
Cmyd_10005145 C2H2 ZF 374 396
Cmyd_10005145 C2H2 ZF 402 424

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSMGAG00000001275 Meleagris gallopavo ENSMGAG00000001275 I 0.826
ENSPSIG00000004516 Pelodiscus sinensis ENSPSIG00000004516 I 0.826
Aan_R005980 Calypte anna Aan_R005980 I 0.826
Zbtb48 Mus musculus ENSMUSG00000028952 I 0.825
Alligator_sinensis_CCG010682.1 Alligator sinensis Alligator_sinensis_CCG010682.1 I 0.825
ENSFALG00000009796 Ficedula albicollis ENSFALG00000009796 I 0.824
Gfo_R002632 Geospiza fortis Gfo_R002632 I 0.823
Pvit_11906 Pogona vitticeps Pvit_11906 I 0.815
ZBTB48 Gallus gallus ENSGALG00000000637 I 0.812
ZBTB48 Bos taurus ENSBTAG00000016735 I 0.811
ZBTB48 Cavia porcellus ENSCPOG00000009998 I 0.811
ENSCSAG00000000746 Chlorocebus sabaeus ENSCSAG00000000746 I 0.811
ZBTB48 Equus caballus ENSECAG00000010788 I 0.811
ZBTB48 Echinops telfairi ENSETEG00000016655 I 0.811
ZBTB48 Homo sapiens ENSG00000204859 D 0.811
ZBTB48 Gorilla gorilla ENSGGOG00000006819 I 0.811
ZBTB48 Loxodonta africana ENSLAFG00000005854 I 0.811
ENSMEUG00000005297 Macropus eugenii ENSMEUG00000005297 I 0.811
ZBTB48 Microcebus murinus ENSMICG00000016317 I 0.811
ZBTB48 Macaca mulatta ENSMMUG00000032281 I 0.811
ENSNLEG00000008569 Nomascus leucogenys ENSNLEG00000008569 I 0.811
ENSPANG00000021173 Papio anubis ENSPANG00000021173 I 0.811
ENSPPYG00000001938 Pongo abelii ENSPPYG00000001938 I 0.811
ZBTB48 Pan troglodytes ENSPTRG00000030844 I 0.811
Zbtb48 Rattus norvegicus ENSRNOG00000009595 I 0.811
ENSP00000366902 Macaca fascicularis ENSP00000366902 I 0.811
ENSSTOG00000026188 Ictidomys tridecemlineatus ENSSTOG00000026188 I 0.810
ENSAMEG00000009650 Ailuropoda melanoleuca ENSAMEG00000009650 I 0.807
ENSMPUG00000006774 Mustela putorius furo ENSMPUG00000006774 I 0.807
ZBTB48 Sus scrofa ENSSSCG00000003383 I 0.807
ENSBTAP00000022249-D1 Bos grunniens ENSBTAP00000022249-D1 I 0.807
ZBTB48 Felis catus ENSFCAG00000000660 I 0.806
ZBTB48 Taeniopygia guttata ENSTGUG00000002589 I 0.801
ZBTB48 Ornithorhynchus anatinus ENSOANG00000012292 I 0.797
ZBTB48 Ochotona princeps ENSOPRG00000012169 I 0.796
Myotis_brandtii_ZBTB48_10024038 Myotis brandtii Myotis_brandtii_ZBTB48_10024038 I 0.796
ZBTB48 Otolemur garnettii ENSOGAG00000001520 I 0.793
Zbtb48 Dipodomys ordii ENSDORG00000009677 I 0.788
ZBTB48 Dasypus novemcinctus ENSDNOG00000004094 I 0.786