Pvit_11906 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_11906 T137307_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB48
M08391_2.00 		Homo sapiens
HHDNTCCCTDR
YHAGGGANHDD		 ChIP-seq
Schmitges et al.(2016)
P10074.MEME 		0.801 0.939
ZBTB48
M08956_2.00 		Homo sapiens
BHBRVTCCCTDR
YHAGGGABYVDV		 Misc
Kulakovskiy et al.(2013)
ZBT48_HUMAN.H11MO.0.C 		0.801 0.939
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_11906 C2H2 ZF 210 233
Pvit_11906 C2H2 ZF 243 264
Pvit_11906 C2H2 ZF 274 296
Pvit_11906 C2H2 ZF 302 325
Pvit_11906 C2H2 ZF 360 383
Pvit_11906 C2H2 ZF 389 411
Pvit_11906 C2H2 ZF 417 439
Pvit_11906 C2H2 ZF 445 468
Pvit_11906 C2H2 ZF 474 496
Pvit_11906 C2H2 ZF 502 524

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSMGAG00000001275 Meleagris gallopavo ENSMGAG00000001275 I 0.816
ENSPSIG00000004516 Pelodiscus sinensis ENSPSIG00000004516 I 0.816
Aan_R005980 Calypte anna Aan_R005980 I 0.816
Zbtb48 Mus musculus ENSMUSG00000028952 I 0.815
Alligator_sinensis_CCG010682.1 Alligator sinensis Alligator_sinensis_CCG010682.1 I 0.815
Cmyd_10005145 Chelonia mydas Cmyd_10005145 I 0.815
ENSFALG00000009796 Ficedula albicollis ENSFALG00000009796 I 0.814
Gfo_R002632 Geospiza fortis Gfo_R002632 I 0.814
ZBTB48 Gallus gallus ENSGALG00000000637 I 0.802
ZBTB48 Bos taurus ENSBTAG00000016735 I 0.801
ZBTB48 Cavia porcellus ENSCPOG00000009998 I 0.801
ENSCSAG00000000746 Chlorocebus sabaeus ENSCSAG00000000746 I 0.801
ZBTB48 Equus caballus ENSECAG00000010788 I 0.801
ZBTB48 Echinops telfairi ENSETEG00000016655 I 0.801
ZBTB48 Homo sapiens ENSG00000204859 D 0.801
ZBTB48 Gorilla gorilla ENSGGOG00000006819 I 0.801
ZBTB48 Loxodonta africana ENSLAFG00000005854 I 0.801
ENSMEUG00000005297 Macropus eugenii ENSMEUG00000005297 I 0.801
ZBTB48 Microcebus murinus ENSMICG00000016317 I 0.801
ZBTB48 Macaca mulatta ENSMMUG00000032281 I 0.801
ENSNLEG00000008569 Nomascus leucogenys ENSNLEG00000008569 I 0.801
ENSPANG00000021173 Papio anubis ENSPANG00000021173 I 0.801
ENSPPYG00000001938 Pongo abelii ENSPPYG00000001938 I 0.801
ZBTB48 Pan troglodytes ENSPTRG00000030844 I 0.801
Zbtb48 Rattus norvegicus ENSRNOG00000009595 I 0.801
ENSP00000366902 Macaca fascicularis ENSP00000366902 I 0.801
ZBTB48 Ornithorhynchus anatinus ENSOANG00000012292 I 0.800
ENSSTOG00000026188 Ictidomys tridecemlineatus ENSSTOG00000026188 I 0.800
ZBTB48 Sus scrofa ENSSSCG00000003383 I 0.799
ENSBTAP00000022249-D1 Bos grunniens ENSBTAP00000022249-D1 I 0.799
ENSAMEG00000009650 Ailuropoda melanoleuca ENSAMEG00000009650 I 0.797
ENSMPUG00000006774 Mustela putorius furo ENSMPUG00000006774 I 0.797
ZBTB48 Felis catus ENSFCAG00000000660 I 0.796
ZBTB48 Taeniopygia guttata ENSTGUG00000002589 I 0.792
ZBTB48 Ochotona princeps ENSOPRG00000012169 I 0.786
Myotis_brandtii_ZBTB48_10024038 Myotis brandtii Myotis_brandtii_ZBTB48_10024038 I 0.786
ZBTB48 Otolemur garnettii ENSOGAG00000001520 I 0.783
ZBTB48 Dasypus novemcinctus ENSDNOG00000004094 I 0.778
Zbtb48 Dipodomys ordii ENSDORG00000009677 I 0.778