CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10012311
(
Chelonia mydas
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Cmyd_10012311
T134371_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zbtb1
M00775_2.00
Mus musculus
NHMMCGCRHN
NDYGCGKKDN
PBM
Weirauch et al.(2013)
pTH2366
0.775
0.974
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10012311
C2H2 ZF
532
553
FRCPNCGQRFETETLVVEHMSN
Cmyd_10012311
C2H2 ZF
572
598
HRRKHFCNLCGKGFYQRCHLREHYTVH
Cmyd_10012311
C2H2 ZF
604
626
FVCQTCGKQFLRERQLRLHNDMH
Cmyd_10012311
C2H2 ZF
660
682
TICQVCFQIFPNNEQLEQHMDVH
Cmyd_10012311
C2H2 ZF
684
707
YTCGVCGAKFNLRKDMRSHYNAKH
Links
Other
C2H2 ZF
family TFs
Other
Chelonia mydas
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy