CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R011707
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R011707
T135829_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R011707
C2H2 ZF
297
318
WKCGQCFKTFTQRILLQMHVCT
Gfo_R011707
C2H2 ZF
325
347
YQCGHCSQSFSQPSELRNHVVTH
Gfo_R011707
C2H2 ZF
353
375
FKCGYCGRAFAGATTLNNHIRTH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Afo_R013833
Aptenodytes forsteri
Afo_R013833
N
0.827
PRDM6
Callithrix jacchus
ENSCJAG00000017318
I
0.827
Aan_R002291
Calypte anna
Aan_R002291
N
0.827
Cmyd_10008583
Chelonia mydas
Cmyd_10008583
N
0.827
ENSLACG00000003287
Latimeria chalumnae
ENSLACG00000003287
N
0.827
ENSPFOG00000000918
Poecilia formosa
ENSPFOG00000000918
I
0.821
PRDM6
Procavia capensis
ENSPCAG00000007467
N
0.827
PRDM6
Taeniopygia guttata
ENSTGUG00000001115
N
0.827
Tal_R005602
Tyto alba
Tal_R005602
N
0.827