Myotis_brandtii_ZNF317_10002973 (Myotis brandtii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Myotis_brandtii_ZNF317_10002973 T136289_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF317
M08242_2.00 		Homo sapiens
CYATTGTTH
DAACAATRG		 ChIP-seq
Najafabadi et al.(2015b)
ZNF317 		0.778 0.953
ZNF317
M08308_2.00 		Homo sapiens
HWGTCWKCTGTY
RACAGMWGACWD		 ChIP-seq
Schmitges et al.(2016)
Q96PQ6_4-7.RCADE 		0.778 0.953
ZNF317
M07584_2.00 		Homo sapiens
RAGAARTCWGCTGTYADTCTWAYY
RRTWAGAHTRACAGCWGAYTTCTY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF317.RCADE.OriginalMapping 		0.778 0.953
ZNF317
M08890_2.00 		Homo sapiens
TRARAARTCWGCTGTYWDTC
GAHWRACAGCWGAYTTYTYA		 Misc
Kulakovskiy et al.(2013)
ZN317_HUMAN.H11MO.0.C 		0.778 0.953
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_ZNF317_10002973 C2H2 ZF 268 290
Myotis_brandtii_ZNF317_10002973 C2H2 ZF 296 318
Myotis_brandtii_ZNF317_10002973 C2H2 ZF 324 346
Myotis_brandtii_ZNF317_10002973 C2H2 ZF 352 374
Myotis_brandtii_ZNF317_10002973 C2H2 ZF 380 402
Myotis_brandtii_ZNF317_10002973 C2H2 ZF 408 430
Myotis_brandtii_ZNF317_10002973 C2H2 ZF 436 458
Myotis_brandtii_ZNF317_10002973 C2H2 ZF 464 486
Myotis_brandtii_ZNF317_10002973 C2H2 ZF 492 514
Myotis_brandtii_ZNF317_10002973 C2H2 ZF 520 542
Myotis_brandtii_ZNF317_10002973 C2H2 ZF 548 570
Myotis_brandtii_ZNF317_10002973 C2H2 ZF 576 598
Myotis_brandtii_ZNF317_10002973 C2H2 ZF 604 626

Links

Other C2H2 ZF family TFs
Other Myotis brandtii TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G24140 Brachypodium distachyon BRADI1G24140 N
MLOC_52196 Hordeum vulgare MLOC_52196 N
LPERR07G16580 Leersia perrieri LPERR07G16580 N
OBART07G19250 Oryza barthii OBART07G19250 N
ORGLA07G0246500 Oryza glaberrima ORGLA07G0246500 N
OGLUM07G19030 Oryza glumaepatula OGLUM07G19030 N
BGIOSGA025973 Oryza indica BGIOSGA025973 N
OLONG_002240 Oryza longistaminata OLONG_002240 N
ONIVA07G17600 Oryza nivara ONIVA07G17600 N
ORUFI07G20030 Oryza rufipogon ORUFI07G20030 N
OS07G0569700 Oryza sativa OS07G0569700 N
Pavir.Ba00594 Panicum virgatum Pavir.Ba00594 N
Pavir.J03938 Panicum virgatum Pavir.J03938 N
Si030697m.g Setaria italica Si030697m.g N
Sb02g036840 Sorghum bicolor Sb02g036840 N
Traes_2BS_67D862F4A Triticum aestivum Traes_2BS_67D862F4A N
Traes_2DS_2CE71025C Triticum aestivum Traes_2DS_2CE71025C N
TRIUR3_28482 Triticum urartu TRIUR3_28482 N
GRMZM2G081782 Zea mays GRMZM2G081782 N