Ogr06244 (Ophisaurus gracilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ogr06244 T136600_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bnc1
M10340_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BNC1_01 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr06244 C2H2 ZF 335 357
Ogr06244 C2H2 ZF 362 384

Links

Other C2H2 ZF family TFs
Other Ophisaurus gracilis TFs

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_503155.1 Arabidopsis lyrata scaffold_503155.1 N 0.000
AT3G59470 Arabidopsis thaliana AT3G59470 N 0.000
Bostr.20903s0171 Boechera stricta Bostr.20903s0171 N 0.000
Bo6g076470 Brassica oleracea Bo6g076470 N 0.000
Bo8g093280 Brassica oleracea Bo8g093280 N 0.000
Bra003377 Brassica rapa Bra003377 N 0.000
PK13380.1 Cannabis sativa PK13380.1 N 0.000
Cagra.5954s0021 Capsella grandiflora Cagra.5954s0021 N 0.000
Carubv10017836m.g Capsella rubella Carubv10017836m.g N 0.000
evm.TU.supercontig_195.42 Carica papaya evm.TU.supercontig_195.42 N 0.000
Ca_02686 Cicer arietinum Ca_02686 N 0.000
Cla010925 Citrullus lanatus Cla010925 N 0.000
Ciclev10021841m.g Citrus clementina Ciclev10021841m.g N 0.000
orange1.1g025532m.g Citrus sinensis orange1.1g025532m.g N 0.000
Cucsa.094440 Cucumis sativus Cucsa.094440 N 0.000
Thhalv10006173m.g Eutrema salsugineum Thhalv10006173m.g N 0.000
gene21669-v1.0-hybrid Fragaria vesca gene21669-v1.0-hybrid N 0.000
GLYMA15G03440 Glycine max GLYMA15G03440 N 0.000
GLYMA12G05600 Glycine max GLYMA12G05600 N 0.000
GLYMA11G13610 Glycine max GLYMA11G13610 N 0.000
Gorai.005G126700 Gossypium raimondii Gorai.005G126700 N 0.000
Gorai.005G016700 Gossypium raimondii Gorai.005G016700 N 0.000
MDP0000618200 Malus domestica MDP0000618200 N 0.000
cassava30288.valid.m1 Manihot esculenta cassava30288.valid.m1 N 0.000
cassava38728.m1 Manihot esculenta cassava38728.m1 N 0.000
MTR_4g067290 Medicago truncatula MTR_4g067290 N 0.000
MTR_2g098920 Medicago truncatula MTR_2g098920 N 0.000
mgf020729m Mimulus guttatus mgf020729m N 0.000
POPTR_0017s05780 Populus trichocarpa POPTR_0017s05780 N 0.000
POPTR_0007s01870 Populus trichocarpa POPTR_0007s01870 N 0.000
PRUPE_ppa011567mg Prunus persica PRUPE_ppa011567mg N 0.000
27914.m000423 Ricinus communis 27914.m000423 N 0.000
SapurV1A.0834s0190 Salix purpurea SapurV1A.0834s0190 N 0.000
SapurV1A.1078s0040 Salix purpurea SapurV1A.1078s0040 N 0.000
SapurV1A.4098s0020 Salix purpurea SapurV1A.4098s0020 N 0.000
PGSC0003DMG402027016 Solanum tuberosum PGSC0003DMG402027016 N 0.000
TCM_020020 Theobroma cacao TCM_020020 N 0.000
VIT_05s0102g00690 Vitis vinifera VIT_05s0102g00690 N 0.000