e_gw.284.52.1 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 e_gw.284.52.1 T138129_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw.284.52.1 C2H2 ZF 1 22
e_gw.284.52.1 C2H2 ZF 28 50
e_gw.284.52.1 C2H2 ZF 58 81
e_gw.284.52.1 C2H2 ZF 87 110

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G72450 Brachypodium distachyon BRADI1G72450 I
BRADI2G11890 Brachypodium distachyon BRADI2G11890 I
BRADI5G25570 Brachypodium distachyon BRADI5G25570 I
Bra021594 Brassica rapa Bra021594 I
evm.TU.supercontig_162.25 Carica papaya evm.TU.supercontig_162.25 I
Ca_07754 Cicer arietinum Ca_07754 I
Ciclev10021622m.g Citrus clementina Ciclev10021622m.g I
Ciclev10024142m.g Citrus clementina Ciclev10024142m.g I
orange1.1g042174m.g Citrus sinensis orange1.1g042174m.g I
orange1.1g047387m.g Citrus sinensis orange1.1g047387m.g I
Cucsa.062330 Cucumis sativus Cucsa.062330 I
GLYMA10G04210 Glycine max GLYMA10G04210 I
GLYMA13G18410 Glycine max GLYMA13G18410 I
GLYMA19G43815 Glycine max GLYMA19G43815 I
Gorai.007G281000 Gossypium raimondii Gorai.007G281000 I
MLOC_51143 Hordeum vulgare MLOC_51143 I
LPERR03G05410 Leersia perrieri LPERR03G05410 N
LPERR03G14670 Leersia perrieri LPERR03G14670 N
Lus10005805.g Linum usitatissimum Lus10005805.g I
Lus10006796.g Linum usitatissimum Lus10006796.g I
Lus10021873.g Linum usitatissimum Lus10021873.g I
LjSGA_017232.1 Lotus japonicus LjSGA_017232.1 I
MDP0000322279 Malus domestica MDP0000322279 I
cassava22677.valid.m1 Manihot esculenta cassava22677.valid.m1 I
cassava47179.m1 Manihot esculenta cassava47179.m1 I
MTR_1g069945 Medicago truncatula MTR_1g069945 I
mgf018693m Mimulus guttatus mgf018693m I
GSMUA_Achr6G27040_001 Musa acuminata GSMUA_Achr6G27040_001 I
OBART03G06100 Oryza barthii OBART03G06100 I
OBART07G26160 Oryza barthii OBART07G26160 N
ORGLA01G0108600 Oryza glaberrima ORGLA01G0108600 I
ORGLA03G0058800 Oryza glaberrima ORGLA03G0058800 N
ORGLA03G0058900 Oryza glaberrima ORGLA03G0058900 I
ORGLA03G0161100 Oryza glaberrima ORGLA03G0161100 N
ORGLA07G0205000 Oryza glaberrima ORGLA07G0205000 N
ORGLA10G0072500 Oryza glaberrima ORGLA10G0072500 I
OGLUM03G06090 Oryza glumaepatula OGLUM03G06090 N
OGLUM03G06100 Oryza glumaepatula OGLUM03G06100 I
OGLUM03G17210 Oryza glumaepatula OGLUM03G17210 N
OGLUM07G26170 Oryza glumaepatula OGLUM07G26170 N
OGLUM10G08400 Oryza glumaepatula OGLUM10G08400 I
BGIOSGA003364 Oryza indica BGIOSGA003364 I
BGIOSGA011326 Oryza indica BGIOSGA011326 I
BGIOSGA012597 Oryza indica BGIOSGA012597 N
BGIOSGA023726 Oryza indica BGIOSGA023726 N
BGIOSGA032849 Oryza indica BGIOSGA032849 I
OMERI03G05920 Oryza meridionalis OMERI03G05920 I
OMERI03G15020 Oryza meridionalis OMERI03G15020 N
OMERI07G22780 Oryza meridionalis OMERI07G22780 N
OMERI10G05820 Oryza meridionalis OMERI10G05820 I
OMERI12G11270 Oryza meridionalis OMERI12G11270 I
ONIVA03G06100 Oryza nivara ONIVA03G06100 N
ONIVA03G06110 Oryza nivara ONIVA03G06110 I
ONIVA03G17860 Oryza nivara ONIVA03G17860 N
ONIVA07G25780 Oryza nivara ONIVA07G25780 N
ONIVA10G08250 Oryza nivara ONIVA10G08250 I
OPUNC01G12900 Oryza punctata OPUNC01G12900 I
OPUNC03G05900 Oryza punctata OPUNC03G05900 I
OPUNC03G16250 Oryza punctata OPUNC03G16250 N
OPUNC07G24590 Oryza punctata OPUNC07G24590 N
ORUFI03G05920 Oryza rufipogon ORUFI03G05920 N
ORUFI03G17430 Oryza rufipogon ORUFI03G17430 N
ORUFI07G27120 Oryza rufipogon ORUFI07G27120 N
ORUFI10G09060 Oryza rufipogon ORUFI10G09060 I
OS01G0313300 Oryza sativa OS01G0313300 I
OS03G0183300 Oryza sativa OS03G0183300 I
OS03G0341000 Oryza sativa OS03G0341000 N
OS07G0674800 Oryza sativa OS07G0674800 N
OS10G0390800 Oryza sativa OS10G0390800 I
Pavir.Ba00136 Panicum virgatum Pavir.Ba00136 I
Pavir.Bb03609 Panicum virgatum Pavir.Bb03609 I
Pavir.Eb02324 Panicum virgatum Pavir.Eb02324 I
Pavir.Ia04158 Panicum virgatum Pavir.Ia04158 I
Pavir.Ib00527 Panicum virgatum Pavir.Ib00527 N
Pavir.Ib00528 Panicum virgatum Pavir.Ib00528 I
Pavir.Ib02796 Panicum virgatum Pavir.Ib02796 I
Pavir.Ib03413 Panicum virgatum Pavir.Ib03413 I
Pavir.J08480 Panicum virgatum Pavir.J08480 I
Pavir.J12680 Panicum virgatum Pavir.J12680 N
e_gw1.60.113.1 Physcomitrella patens e_gw1.60.113.1 I
POPTR_0002s04020 Populus trichocarpa POPTR_0002s04020 I
POPTR_0005s24460 Populus trichocarpa POPTR_0005s24460 I
POPTR_0011s06010 Populus trichocarpa POPTR_0011s06010 I
POPTR_0013s04240 Populus trichocarpa POPTR_0013s04240 I
SapurV1A.0006s0850 Salix purpurea SapurV1A.0006s0850 I
SapurV1A.0233s0360 Salix purpurea SapurV1A.0233s0360 I
SapurV1A.0233s0370 Salix purpurea SapurV1A.0233s0370 I
SapurV1A.4312s0010 Salix purpurea SapurV1A.4312s0010 I
SELMODRAFT_17703 Selaginella moellendorffii SELMODRAFT_17703 I
SELMODRAFT_73134 Selaginella moellendorffii SELMODRAFT_73134 I
SELMODRAFT_73164 Selaginella moellendorffii SELMODRAFT_73164 I
SELMODRAFT_73169 Selaginella moellendorffii SELMODRAFT_73169 I
Si002845m.g Setaria italica Si002845m.g I
Si031079m.g Setaria italica Si031079m.g I
Si032815m.g Setaria italica Si032815m.g I
Si036118m.g Setaria italica Si036118m.g I
Si036821m.g Setaria italica Si036821m.g N
Sb01g045040 Sorghum bicolor Sb01g045040 I
Sb02g042760 Sorghum bicolor Sb02g042760 I
Sb03g012890 Sorghum bicolor Sb03g012890 I
TCM_026233 Theobroma cacao TCM_026233 I
Traes_2AS_72E9B68D2 Triticum aestivum Traes_2AS_72E9B68D2 I
Traes_2BS_5E7287209 Triticum aestivum Traes_2BS_5E7287209 I
TRAES3BF171600010CFD_g Triticum aestivum TRAES3BF171600010CFD_g I
Traes_4AS_8A64DBE8E Triticum aestivum Traes_4AS_8A64DBE8E I
Traes_4BL_7EC2BFC7B Triticum aestivum Traes_4BL_7EC2BFC7B I
Traes_5BL_98D063967 Triticum aestivum Traes_5BL_98D063967 I
Traes_5DL_41E3B1B23 Triticum aestivum Traes_5DL_41E3B1B23 I
AC206951.3_FG016 Zea mays AC206951.3_FG016 N
AC206951.3_FG017 Zea mays AC206951.3_FG017 I
GRMZM2G025062 Zea mays GRMZM2G025062 I
GRMZM2G053503 Zea mays GRMZM2G053503 I
GRMZM2G114820 Zea mays GRMZM2G114820 I
GRMZM2G148333 Zea mays GRMZM2G148333 I
GRMZM2G169382 Zea mays GRMZM2G169382 I
GRMZM2G478965 Zea mays GRMZM2G478965 I