e_gw.6.95.1 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 e_gw.6.95.1 T138379_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Kah
M03690_2.00 		Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN		 SELEX
Nitta et al.(2015)
CG17181_1 		0.766 0.847
Kah
M06137_2.00 		Drosophila melanogaster
VCCACCTGT
ACAGGTGGB		 B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144 		0.766 0.847
Kah
M06138_2.00 		Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN		 B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144 		0.766 0.847
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw.6.95.1 C2H2 ZF 1 21
e_gw.6.95.1 C2H2 ZF 31 52
e_gw.6.95.1 C2H2 ZF 56 78
e_gw.6.95.1 C2H2 ZF 84 106
e_gw.6.95.1 C2H2 ZF 112 133

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI001198 Acyrthosiphon pisum ACYPI001198 I 0.771
AAEL003978 Aedes aegypti AAEL003978 I 0.766
AALB005349 Anopheles albimanus AALB005349 I 0.766
AATE004981 Anopheles atroparvus AATE004981 I 0.774
ACOM027947 Anopheles coluzzii ACOM027947 I 0.768
ACUA018690 Anopheles culicifacies ACUA018690 I 0.768
ADAC007927 Anopheles darlingi ADAC007927 I 0.766
AFAF000519 Anopheles farauti AFAF000519 I 0.766
AFUN000435 Anopheles funestus AFUN000435 I 0.768
AGAP005390 Anopheles gambiae AGAP005390 I 0.768
AMAM014424 Anopheles maculatus AMAM014424 I 0.768
AMEC006310 Anopheles melas AMEC006310 I 0.768
AMEM010751 Anopheles merus AMEM010751 I 0.768
AMIN007420 Anopheles minimus AMIN007420 I 0.768
AQUA007695 Anopheles quadriannulatus AQUA007695 I 0.768
GB42492 Apis mellifera GB42492 I 0.790
ACEP27778 Atta cephalotes ACEP27778 I 0.792
BGLB003738 Biomphalaria glabrata BGLB003738 I 0.787
CapteG19364 Capitella teleta CapteG19364 I 0.784
CGI_10005451 Crassostrea gigas CGI_10005451 I 0.792
CpipJ_CPIJ005455 Culex pipiens CpipJ_CPIJ005455 I 0.776
CPIJ005455 Culex quinquefasciatus CPIJ005455 I 0.776
DAPPUDRAFT_53927 Daphnia pulex DAPPUDRAFT_53927 I 0.773
YQE_07798 Dendroctonus ponderosae YQE_07798 I 0.792
GF25038 Drosophila ananassae FBgn0102030 I 0.768
GG14656 Drosophila erecta FBgn0106912 I 0.768
GH15211 Drosophila grimshawi FBgn0122686 I 0.766
Kah Drosophila melanogaster FBgn0035144 D 0.766
GI16731 Drosophila mojavensis FBgn0139479 I 0.768
GA14370 Drosophila pseudoobscura FBgn0074398 I 0.766
GM14272 Drosophila sechellia FBgn0169198 I 0.766
GJ12475 Drosophila virilis FBgn0199717 I 0.768
GK17557 Drosophila willistoni FBgn0219556 I 0.766
GE21016 Drosophila yakuba FBgn0238298 I 0.766
HelroG68814 Helobdella robusta HelroG68814 N 0.764
LDEC013204 Leptinotarsa decemlineata LDEC013204 I 0.792
LCUP006416 Lucilia cuprina LCUP006416 I 0.768
LLOJ001905 Lutzomyia longipalpis LLOJ001905 I 0.772
MDOA000347 Musca domestica MDOA000347 I 0.768
NV16451 Nasonia vitripennis NV16451 I 0.778
Ocbimv22026834m.g Octopus bimaculoides Ocbimv22026834m.g I 0.790
PHUM530390 Pediculus humanus PHUM530390 I 0.792
SINV14822 Solenopsis invicta SINV14822 I 0.792
SPU_015640 Strongylocentrotus purpuratus SPU_015640 I 0.795
tetur14g01820 Tetranychus urticae tetur14g01820 I 0.772
TC002803 Tribolium castaneum TC002803 I 0.780
L798_08219 Zootermopsis nevadensis L798_08219 I 0.804