estExt_GenewiseH_1.C_7160001 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_GenewiseH_1.C_7160001 T138908_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YY1
M08237_2.00 		Homo sapiens
VNVGCVGCCATBTTD
HAAVATGGCBGCBNB		 ChIP-seq
Najafabadi et al.(2015b)
YY1 		0.803 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_GenewiseH_1.C_7160001 C2H2 ZF 260 284
estExt_GenewiseH_1.C_7160001 C2H2 ZF 290 314

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh1_pm.00626_#_98 Aspergillus carbonarius fgenesh1_pm.00626_#_98 N
AFUA_7G04710 Aspergillus fumigatus CADAFUAG00009441 N
ANIA_03761 Aspergillus nidulans CADANIAG00004960 N
CADANGAG00010655 Aspergillus niger CADANGAG00010655 N
EURHEDRAFT_519160 Aspergillus ruber EURHEDRAFT_519160 N
PMAA_089950 Penicillium marneffei PMAA_089950 N
PDE_00588 Penicillium oxalicum PDE_00588 N
PTRG_08762 Pyrenophora triticirepentis PTRG_08762 N
PMAA_089950 Talaromyces marneffei PMAA_089950 N