estExt_GenewiseH_1.C_7160001 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_GenewiseH_1.C_7160001 T138908_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YY1
M08237_2.00 		Homo sapiens
VNVGCVGCCATBTTD
HAAVATGGCBGCBNB		 ChIP-seq
Najafabadi et al.(2015b)
YY1 		0.803 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_GenewiseH_1.C_7160001 C2H2 ZF 260 284
estExt_GenewiseH_1.C_7160001 C2H2 ZF 290 314

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSDNOG00000023949 Dasypus novemcinctus ENSDNOG00000023949 I 0.803
YY1 Homo sapiens ENSG00000100811 D 0.803
ENSCJAG00000033589 Callithrix jacchus ENSCJAG00000033589 I 0.784
TTAC_0000487701 Hydatigera taeniaeformis TTAC_0000487701 I 0.764
HNAJ_0001343801 Hymenolepis nana HNAJ_0001343801 I 0.760
SPER_0000281501 Spirometra erinaceieuropaei SPER_0000281501 I 0.760