CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPER_0000281501
(
Spirometra erinaceieuropaei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SPER_0000281501
T156574_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
YY1
M08237_2.00
Homo sapiens
VNVGCVGCCATBTTD
HAAVATGGCBGCBNB
ChIP-seq
Najafabadi et al.(2015b)
YY1
0.760
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPER_0000281501-mRNA-1
C2H2 ZF
29
48
LGCGKRFSLDFNLRTHVRIH
SPER_0000281501-mRNA-1
C2H2 ZF
54
78
YMCPFEGCSKRFAQSTNLKSHIMTH
Links
Other
C2H2 ZF
family TFs
Other
Spirometra erinaceieuropaei
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HNAJ_0001343801
Hymenolepis nana
HNAJ_0001343801
I
0.788
ENSDNOG00000023949
Dasypus novemcinctus
ENSDNOG00000023949
I
0.760
YY1
Homo sapiens
ENSG00000100811
D
0.760
estExt_GenewiseH_1.C_7160001
Branchiostoma floridae
estExt_GenewiseH_1.C_7160001
I
0.760
TTAC_0000487701
Hydatigera taeniaeformis
TTAC_0000487701
I
0.760