CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.25.121.1
(
Phycomyces blakesleeanus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw1.25.121.1
T140053_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RO3G_05801
M01434_2.00
Rhizopus oryzae
NNGATYNNCN
NGNNRATCNN
PBM
Najafabadi et al.(2015a)
pTH10221
0.763
0.783
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.25.121.1
C2H2 ZF
1
23
YVCMFCGKKFSRPSSLRIHTYSH
gw1.25.121.1
C2H2 ZF
29
53
FVCTEENCGRRFSVQSNMRRHMRVH
Links
Other
C2H2 ZF
family TFs
Other
Phycomyces blakesleeanus
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OIDMADRAFT_36483
Oidiodendron maius
OIDMADRAFT_36483
N
0.000