evm.TU.supercontig_6.32 (Carica papaya)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 evm.TU.supercontig_6.32 T142925_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.822 0.870
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.822 0.870
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.787 0.826
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.787 0.826
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.783 0.826
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.783 0.826
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.783 0.826
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.766 0.696
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.766 0.674
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_6.32 C2H2 ZF 89 111
evm.model.supercontig_6.32 C2H2 ZF 152 174

Links

Other C2H2 ZF family TFs
Other Carica papaya TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI005393 Acyrthosiphon pisum ACYPI005393 N 0.000
AAEL014286 Aedes aegypti AAEL014286 I 0.000
AALB001524 Anopheles albimanus AALB001524 I 0.000
AARA004970 Anopheles arabiensis AARA004970 N 0.000
AATE004999 Anopheles atroparvus AATE004999 N 0.000
ACHR001068 Anopheles christyi ACHR001068 N 0.000
ACOM030425 Anopheles coluzzii ACOM030425 N 0.000
ACUA005970 Anopheles culicifacies ACUA005970 N 0.000
ADAC005010 Anopheles darlingi ADAC005010 I 0.000
ADIR011315 Anopheles dirus ADIR011315 N 0.000
AEPI008902 Anopheles epiroticus AEPI008902 N 0.000
AFAF000916 Anopheles farauti AFAF000916 N 0.000
AFUN003983 Anopheles funestus AFUN003983 N 0.000
AGAP008160 Anopheles gambiae AGAP008160 N 0.000
AMEC009973 Anopheles melas AMEC009973 N 0.000
AMEC012340 Anopheles melas AMEC012340 N 0.000
AMEM015420 Anopheles merus AMEM015420 N 0.000
AMIN006115 Anopheles minimus AMIN006115 N 0.000
AQUA000993 Anopheles quadriannulatus AQUA000993 N 0.000
ASIS021966 Anopheles sinensis ASIS021966 N 0.000
ASTEI09594 Anopheles stephensi ASTEI09594 N 0.000
GB44791 Apis mellifera GB44791 I 0.000
BGIBMGA013826 Bombyx mori BGIBMGA013826 N 0.000
Cflo_09641--XP_393231.3_APIME Camponotus floridanus Cflo_09641--XP_393231.3_APIME I 0.000
CLEC001097 Cimex lectularius CLEC001097 N 0.000
CpipJ_CPIJ004862 Culex pipiens CpipJ_CPIJ004862 I 0.000
CPIJ004862 Culex quinquefasciatus CPIJ004862 I 0.000
YQE_02334 Dendroctonus ponderosae YQE_02334 N 0.000
GF19984 Drosophila ananassae FBgn0096991 I 0.000
GG19364 Drosophila erecta FBgn0111568 I 0.000
GI14170 Drosophila mojavensis FBgn0136923 I 0.000
GL24710 Drosophila persimilis FBgn0162298 I 0.000
GM22518 Drosophila sechellia FBgn0177388 I 0.000
GD24674 Drosophila simulans FBgn0196001 I 0.000
GK16252 Drosophila willistoni FBgn0218254 I 0.000
GE16012 Drosophila yakuba FBgn0233564 I 0.000
HHAL003965-PA Halyomorpha halys HHAL003965-PA N 0.000
HMEL017165 Heliconius melpomene HMEL017165 I 0.000
LCUP002256 Lucilia cuprina LCUP002256 I 0.000
LLOJ006683 Lutzomyia longipalpis LLOJ006683 I 0.000
MDOA009261 Musca domestica MDOA009261 I 0.000
NV17529 Nasonia vitripennis NV17529 N 0.000
NEMVEDRAFT_v1g38726 Nematostella vectensis NEMVEDRAFT_v1g38726 I 0.000
PHUM518530 Pediculus humanus PHUM518530 N 0.000
PPAI005590 Phlebotomus papatasi PPAI005590 I 0.000
TC030738 Tribolium castaneum TC030738 N 0.000
mybl1.L Xenopus laevis XB-GENE-986561 I 0.000
L798_09102 Zootermopsis nevadensis L798_09102 N 0.000