orange1.1g019587m.g (Citrus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 orange1.1g019587m.g T143265_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g019587m C2H2 ZF 258 279
orange1.1g019587m C2H2 ZF 278 304

Links

Other C2H2 ZF family TFs
Other Citrus sinensis TFs

256 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_5.71 Carica papaya evm.TU.supercontig_5.71 N 0.000
Cla017994 Citrullus lanatus Cla017994 N 0.000
Cla018653 Citrullus lanatus Cla018653 N 0.000
Ciclev10012757m.g Citrus clementina Ciclev10012757m.g N 0.000
orange1.1g039696m.g Citrus sinensis orange1.1g039696m.g N 0.000
Cucsa.083150 Cucumis sativus Cucsa.083150 N 0.000
Cucsa.378470 Cucumis sativus Cucsa.378470 N 0.000
Eucgr.K02071 Eucalyptus grandis Eucgr.K02071 N 0.000
GLYMA10G07740 Glycine max GLYMA10G07740 N 0.000
Gorai.009G407200 Gossypium raimondii Gorai.009G407200 N 0.000
Gorai.002G241800 Gossypium raimondii Gorai.002G241800 N 0.000
Gorai.002G159400 Gossypium raimondii Gorai.002G159400 N 0.000
cassava32861.m1 Manihot esculenta cassava32861.m1 N 0.000
cassava21723.m1 Manihot esculenta cassava21723.m1 N 0.000
Pm026227 Prunus mume Pm026227 N 0.000
PRUPE_ppa020711mg Prunus persica PRUPE_ppa020711mg N 0.000
29092.m000462 Ricinus communis 29092.m000462 N 0.000
Solyc10g083560.1 Solanum lycopersicum Solyc10g083560.1 I 0.000
PGSC0003DMG400045042 Solanum tuberosum PGSC0003DMG400045042 I 0.000
HRD Vitis vinifera VIT_08s0007g03810 N 0.000